RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 NXNL1Q96CM4 212 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 LINGO1Q96FE5 620 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 HSPA12BQ96MM6 686 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 FAM111AQ96PZ2 611 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 MRPL57Q9BQC6 102 aaKnown RBP12.83□□□□□ -0.36
CPNE3-205ENST00000522240 TIMM29Q9BSF4 260 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 MRPL46Q9H2W6 279 aaKnown RBP12.83□□□□□ -0.36
CPNE3-205ENST00000522240 TFB2MQ9H5Q4 396 aaKnown RBP12.83□□□□□ -0.36
CPNE3-205ENST00000522240 INTS9Q9NV88 658 aaKnown RBP12.83□□□□□ -0.36
CPNE3-205ENST00000522240 TMEM216Q9P0N5 145 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 TMEM98Q9Y2Y6 226 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 LRP4O75096 1905 aa12.83□□□□□ -0.36
CPNE3-205ENST00000522240 KMT2EQ8IZD2 1858 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 SLC5A10A0PJK1 596 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 PRSS38A1L453 326 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 MGAT4DA6NG13 374 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 TMEM202A6NGA9 273 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 PROB1E7EW31 1015 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 H0Y8X5 98 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 KCNJ13O60928 360 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 GPC4O75487 556 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 TFEBP19484 476 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 MAPK9P45984 424 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 THOP1P52888 689 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 RACK1P63244 317 aaKnown RBP12.82□□□□□ -0.36
CPNE3-205ENST00000522240 FOXK2Q01167 660 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 CSTF1Q05048 431 aaKnown RBP12.82□□□□□ -0.36
CPNE3-205ENST00000522240 DMPKQ09013 629 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 OVGP1Q12889 678 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 RPA4Q13156 261 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 BOP1Q14137 746 aaKnown RBP12.82□□□□□ -0.36
CPNE3-205ENST00000522240 PTK2BQ14289 1009 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 PROX2Q3B8N5 592 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 ZNF528Q3MIS6 628 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 ACSBG2Q5FVE4 666 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 HHATQ5VTY9 493 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 LVRNQ6Q4G3 990 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 TSSK4Q6SA08 328 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 CRTC3Q6UUV7 619 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 LPCAT2Q7L5N7 544 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 ADAMTSL2Q86TH1 951 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 DCP2Q8IU60 420 aaKnown RBP12.82□□□□□ -0.36
CPNE3-205ENST00000522240 GALNT13Q8IUC8 556 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 FSTL5Q8N475 847 aaPredicted RBP12.82□□□□□ -0.36
CPNE3-205ENST00000522240 BEND7Q8N7W2 519 aaPredicted RBP12.82□□□□□ -0.36
CPNE3-205ENST00000522240 OR13H1Q8NG92 308 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 EEF1AKMT1Q8WVE0 214 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 GAB3Q8WWW8 586 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 DNASE2BQ8WZ79 361 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 NELL1Q92832 810 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 KIAA1191Q96A73 305 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 TMEM159Q96B96 161 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 SLC6A18Q96N87 628 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 FGF22Q9HCT0 170 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 ZNF358Q9NW07 568 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 XPR1Q9UBH6 696 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 RUVBL2Q9Y230 463 aaKnown RBP12.82□□□□□ -0.36
CPNE3-205ENST00000522240 CDYLQ9Y232 598 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 INVSQ9Y283 1065 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 CA5BQ9Y2D0 317 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 VPS13AQ96RL7 3174 aa12.82□□□□□ -0.36
CPNE3-205ENST00000522240 TARM1B6A8C7 271 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 TK2O00142 265 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 POLR3GO15318 223 aaPredicted RBP12.81□□□□□ -0.36
CPNE3-205ENST00000522240 ZBTB14O43829 449 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 GFRA3O60609 400 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 KERAO60938 352 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 POP7O75817 140 aaKnown RBP12.81□□□□□ -0.36
CPNE3-205ENST00000522240 SLCO2B1O94956 709 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 VCLP18206 1134 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 PBLDP30039 288 aaPredicted RBP12.81□□□□□ -0.36
CPNE3-205ENST00000522240 GLRBP48167 497 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 SERPINB4P48594 390 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 WDR4P57081 412 aaKnown RBP12.81□□□□□ -0.36
CPNE3-205ENST00000522240 ARHGAP8P85298 464 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 IL9RQ01113 521 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 SP140Q13342 867 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 PYCR3Q53H96 274 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 WDR45BQ5MNZ6 344 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 C16orf46Q6P387 395 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 Q6ZSR6 202 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 AMZ2Q86W34 360 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 MFSD2AQ8NA29 543 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 ARMC2Q8NEN0 867 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 MDM1Q8TC05 714 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 MGARPQ8TDB4 240 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 ATOH1Q92858 354 aaPredicted RBP12.81□□□□□ -0.36
CPNE3-205ENST00000522240 SCYL1Q96KG9 808 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 OR2M4Q96R27 311 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 DPEP2Q9H4A9 486 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 COG4Q9H9E3 785 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 AASDHPPTQ9NRN7 309 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 COPG2Q9UBF2 871 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 GULP1Q9UBP9 304 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 KLQ9UEF7 1012 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 SUFUQ9UMX1 484 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 CEP192Q8TEP8 1941 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 ZNF292O60281 2723 aa12.81□□□□□ -0.36
CPNE3-205ENST00000522240 TNRC6BQ9UPQ9 1833 aaKnown RBP12.81□□□□□ -0.36
CPNE3-205ENST00000522240 CACNA1IQ9P0X4 2223 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms