RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 NUP62P37198 522 aaPredicted RBP13.64□□□□□ -0.23
SYNPO-205ENST00000522122 QPRTQ15274 297 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 TLR1Q15399 786 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 MPPE1Q53F39 396 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 RGMBQ6NW40 437 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 GLB1L3Q8NCI6 653 aaPredicted RBP13.64□□□□□ -0.23
SYNPO-205ENST00000522122 MZB1Q8WU39 189 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 KCTD13Q8WZ19 329 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 OSBPL2Q9H1P3 480 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 CFAP97Q9P2B7 532 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 GTF2IRD1Q9UHL9 959 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 FBXO10Q9UK96 956 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 NCKAP1Q9Y2A7 1128 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 TELO2Q9Y4R8 837 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 H3BSA7 217 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 SYN3O14994 580 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 SLC35G4P0C7Q5 338 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 COL6A1P12109 1028 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 AP1S1P61966 158 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 HERVK_113P63132 956 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 ELP6Q0PNE2 266 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 TAZQ16635 292 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 PYDC2Q56P42 97 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 CHSY3Q70JA7 882 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 TMPRSS11BQ86T26 416 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 SERPINA9Q86WD7 417 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 PLD6Q8N2A8 252 aaKnown RBP13.64□□□□□ -0.23
SYNPO-205ENST00000522122 SVOPLQ8N434 492 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 C11orf65Q8NCR3 313 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 TEX47Q8TBZ9 253 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 AP3S1Q92572 193 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 ERVK-6Q9BXR3 956 aa13.64□□□□□ -0.23
SYNPO-205ENST00000522122 MRPL39Q9NYK5 338 aaKnown RBP13.64□□□□□ -0.23
SYNPO-205ENST00000522122 COL16A1Q07092 1604 aaPredicted RBP13.63□□□□□ -0.23
SYNPO-205ENST00000522122 CCDC162PA2VCL2 907 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 STX16-NPEPL1H3BU86 382 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 IDH3BO43837 385 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 STBD1O95210 358 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 PRG2P13727 222 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 GTF2E2P29084 291 aaKnown RBP13.63□□□□□ -0.23
SYNPO-205ENST00000522122 RAB15P59190 212 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 MTAPQ13126 283 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 VARS2Q5ST30 1063 aaKnown RBP13.63□□□□□ -0.23
SYNPO-205ENST00000522122 HLA-DQA1Q5Y7H0 255 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 C17orf64Q86WR6 236 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 OLIG1Q8TAK6 271 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 CANT1Q8WVQ1 401 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 SLC13A3Q8WWT9 602 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 FEM1CQ96JP0 617 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 COQ7Q99807 217 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 IGKV6D-21A0A0A0MT36 114 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 H3BM21 787 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 ASGR1P07306 291 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 ZNF12P17014 697 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 NR4A1P22736 598 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 CCR4P51679 360 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 FAM174BQ3ZCQ3 159 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 LDLRAP1Q5SW96 308 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 KCTD8Q6ZWB6 473 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 IZUMO1Q8IYV9 350 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 SIDT2Q8NBJ9 832 aaKnown RBP13.63□□□□□ -0.23
SYNPO-205ENST00000522122 PIK3C3Q8NEB9 887 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 A8MT66 165 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 LOC110117498-PIK3R3F6TDL0 507 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 AHSGP02765 367 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 ANXA4P09525 319 aaPredicted RBP13.63□□□□□ -0.23
SYNPO-205ENST00000522122 ARHGAP1Q07960 439 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 TAF1AQ15573 450 aaPredicted RBP13.63□□□□□ -0.23
SYNPO-205ENST00000522122 ZBED5Q49AG3 693 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 LIX1Q8N485 282 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 CD320Q9NPF0 282 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 GMEB1Q9Y692 573 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 IQCF5A8MTL0 148 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 TNFRSF11BO00300 401 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 PLK4O00444 970 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 PPEF2O14830 753 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 HLA-DQB2P05538 268 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 RAP2AP10114 183 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 PPM1AP35813 382 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 ERVK-8P63133 956 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 SLC10A2Q12908 348 aaPredicted RBP13.63□□□□□ -0.23
SYNPO-205ENST00000522122 SH3D19Q5HYK7 790 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 AHSA2Q719I0 299 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 ANKRD46Q86W74 232 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 ANKRD49Q8WVL7 239 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 FUBP3Q96I24 572 aaKnown RBP eCLIP13.63□□□□□ -0.23
SYNPO-205ENST00000522122 C1orf109Q9NX04 203 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 UBAP1Q9NZ09 502 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 CNOT11Q9UKZ1 510 aaKnown RBP13.63□□□□□ -0.23
SYNPO-205ENST00000522122 TLL2Q9Y6L7 1015 aa13.63□□□□□ -0.23
SYNPO-205ENST00000522122 A0A1W2PQ67 120 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 H0YJX3 145 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 CXCR6O00574 342 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 EI24O14681 340 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 GRM6O15303 877 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 NUDT14O95848 222 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 F7P08709 466 aaPredicted RBP13.62□□□□□ -0.23
SYNPO-205ENST00000522122 RHDQ02161 417 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 MERTKQ12866 999 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 CHIT1Q13231 466 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms