RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 DDX18Q9NVP1 670 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-223ENST00000520520 TMEM248Q9NWD8 314 aa8.53□□□□□ -1.04
CTNNA1-223ENST00000520520 CHCHD3Q9NX63 227 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-223ENST00000520520 SMPD3Q9NY59 655 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-223ENST00000520520 ZNHIT2Q9UHR6 403 aa8.53□□□□□ -1.04
CTNNA1-223ENST00000520520 BLOC1S6Q9UL45 172 aa8.53□□□□□ -1.04
CTNNA1-223ENST00000520520 TLR6Q9Y2C9 796 aa8.53□□□□□ -1.04
CTNNA1-223ENST00000520520 RNF11Q9Y3C5 154 aa8.53□□□□□ -1.04
CTNNA1-223ENST00000520520 COMMD10Q9Y6G5 202 aa8.53□□□□□ -1.04
CTNNA1-223ENST00000520520 MYO18AQ92614 2054 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-223ENST00000520520 A0A1W2PP18 115 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 C7orf72A4D263 438 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 NEMP2A6NFY4 417 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 SAC3D1A6NKF1 404 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 SUPT3HB4E1H0 165 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 M0QZQ0 153 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 UBXN8O00124 270 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 NME4O00746 187 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 PIP5K1BO14986 540 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 SYN3O14994 580 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 ARPC2O15144 300 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 CD3EAPO15446 510 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 CLOCKO15516 846 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 SNX2O60749 519 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 SUPT3HO75486 399 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 EEDO75530 441 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 ABLIM3O94929 683 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 ESRRBO95718 433 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 HPRP00739 348 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 ALBP02768 609 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 S100BP04271 92 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 F7P08709 466 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 POU2F2P09086 479 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 CD1DP15813 335 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 ZNF37AP17032 561 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 TGM1P22735 817 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 MSX2P35548 267 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 CHRNA4P43681 627 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 CXCL12P48061 93 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 PXNP49023 591 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 CCR3P51677 355 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 PLK1P53350 603 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 SLC5A3P53794 718 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 TBX4P57082 545 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 YBEYP58557 167 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 MERTKQ12866 999 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 TMED1Q13445 227 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 EIF4EBP2Q13542 120 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 NFE2Q16621 373 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 UNC50Q53HI1 259 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 NHSL2Q5HYW2 709 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 AARS2Q5JTZ9 985 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 GPR158Q5T848 1215 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 ANKS6Q68DC2 871 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 LAIR1Q6GTX8 287 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 LAYNQ6UX15 382 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 ARHGAP36Q6ZRI8 547 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 SPRED1Q7Z699 444 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 PTAR1Q7Z6K3 402 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 PATL1Q86TB9 770 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 ZNF554Q86TJ5 538 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 PTRH1Q86Y79 214 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 CLVS1Q8IUQ0 354 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 TCEAL8Q8IYN2 117 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 SPATA6LQ8N4H0 392 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 CBR4Q8N4T8 237 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 NKAPQ8N5F7 415 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 DHRSXQ8N5I4 330 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 TEX26Q8N6G2 289 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 TTC16Q8NEE8 873 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 TRPV3Q8NET8 790 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 GIPC2Q8TF65 315 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 EXT2Q93063 718 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 BORCS5Q969J3 196 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 LRRC58Q96CX6 371 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 RSPRY1Q96DX4 576 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 FUBP3Q96I24 572 aaKnown RBP eCLIP8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 VPS50Q96JG6 964 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 BDH2Q9BUT1 245 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 DERL2Q9GZP9 239 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 ALG2Q9H553 416 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 AKTIPQ9H8T0 292 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 MAGEE1Q9HCI5 957 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 SEMA4GQ9NTN9 838 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 TAS2R13Q9NYV9 303 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.52□□□□□ -1.053e-7■■■■□ 24.5
CTNNA1-223ENST00000520520 ZIM2Q9NZV7 527 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 SEPT3Q9UH03 358 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 RNF112Q9ULX5 631 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 SLC27A5Q9Y2P5 690 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 YIPF1Q9Y548 306 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 HS3ST4Q9Y661 456 aa8.52□□□□□ -1.05
CTNNA1-223ENST00000520520 GPR179Q6PRD1 2367 aa8.51□□□□□ -1.05
CTNNA1-223ENST00000520520 NYNRINQ9P2P1 1898 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-223ENST00000520520 NCOR2Q9Y618 2525 aa8.51□□□□□ -1.05
CTNNA1-223ENST00000520520 CEP250Q9BV73 2442 aa8.51□□□□□ -1.05
CTNNA1-223ENST00000520520 A0A0J9YVX5 310 aa8.51□□□□□ -1.05
CTNNA1-223ENST00000520520 A0A1B0GVG6 124 aa8.51□□□□□ -1.05
CTNNA1-223ENST00000520520 TTC24A2A3L6 582 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms