RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 SUPT7LO94864 414 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 SLC25A14O95258 325 aaPredicted RBP14.25□□□□□ -0.13
CLN8-204ENST00000519254 PDGFBP01127 241 aaPredicted RBP14.25□□□□□ -0.13
CLN8-204ENST00000519254 ENO1P06733 434 aaKnown RBP14.25□□□□□ -0.13
CLN8-204ENST00000519254 ESRRAP11474 423 aaPredicted RBP14.25□□□□□ -0.13
CLN8-204ENST00000519254 ITGB6P18564 788 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 AOC1P19801 751 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 MAT2AP31153 395 aaKnown RBP14.25□□□□□ -0.13
CLN8-204ENST00000519254 B4GALNT1Q00973 533 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 SFSWAPQ12872 951 aaKnown RBP14.25□□□□□ -0.13
CLN8-204ENST00000519254 TBCCQ15814 346 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 RAET1GQ6H3X3 334 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 NRSN1Q8IZ57 195 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 TRAM1L1Q8N609 369 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 PPP1R36Q96LQ0 422 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 ZSCAN5AQ9BUG6 496 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 TPSD1Q9BZJ3 242 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 CHRDQ9H2X0 955 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 TCF7L2Q9NQB0 619 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 EBF1Q9UH73 591 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 CYP8B1Q9UNU6 501 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 ZFR2Q9UPR6 939 aaKnown RBP14.25□□□□□ -0.13
CLN8-204ENST00000519254 IGLV3-16A0A075B6K0 115 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 A0A1W2PQU0 124 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 SYCE1LA8MT33 242 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 FADS2P1A8MWK0 482 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 INPP4BO15327 924 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 GFAPP14136 432 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 TSPAN8P19075 237 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 EPHA3P29320 983 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 ACSL1P33121 698 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 PXNP49023 591 aaPredicted RBP14.24□□□□□ -0.13
CLN8-204ENST00000519254 HK3P52790 923 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 MTAPQ13126 283 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 PDCD2Q16342 344 aaPredicted RBP14.24□□□□□ -0.13
CLN8-204ENST00000519254 LSM12Q3MHD2 195 aaKnown RBP14.24□□□□□ -0.13
CLN8-204ENST00000519254 GPRC6AQ5T6X5 926 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 METTL21CQ5VZV1 264 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 RINLQ6ZS11 566 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 CYP2U1Q7Z449 544 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 RAB44Q7Z6P3 723 aaPredicted RBP14.24□□□□□ -0.13
CLN8-204ENST00000519254 PELI3Q8N2H9 469 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 FBXO39Q8N4B4 442 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 FAM131CQ96AQ9 280 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 CLDN23Q96B33 292 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 MIPEPQ99797 713 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 TBC1D10AQ9BXI6 508 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 E9PBE3 544 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 K7ESM1 405 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 KLHL41O60662 606 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 MTX2O75431 263 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 TRIM16O95361 564 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 PCCBP05166 539 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 NCF2P19878 526 aaPredicted RBP14.24□□□□□ -0.13
CLN8-204ENST00000519254 AKT1P31749 480 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 NSG1P42857 185 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 CDH13P55290 713 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 PPP2CBP62714 309 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 RPS21P63220 83 aaKnown RBP14.24□□□□□ -0.13
CLN8-204ENST00000519254 PPP2CAP67775 309 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 SIGLEC14Q08ET2 396 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 TJAP1Q5JTD0 557 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 KIAA1161Q6NSJ0 714 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 CYB5D1Q6P9G0 228 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 GPSM1Q86YR5 675 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 SPEM1Q8N4L4 309 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 ULK4Q96C45 1275 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 NSUN5Q96P11 429 aaKnown RBP14.24□□□□□ -0.13
CLN8-204ENST00000519254 COPS8Q99627 209 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 BTBD10Q9BSF8 475 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 BTBD1Q9H0C5 482 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 LATS2Q9NRM7 1088 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 NFKBIL1Q9UBC1 381 aaPredicted RBP14.24□□□□□ -0.13
CLN8-204ENST00000519254 TAGLN3Q9UI15 199 aa14.24□□□□□ -0.13
CLN8-204ENST00000519254 PPP6CO00743 305 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 SDHDO14521 159 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 EEF1DP29692 281 aaKnown RBP14.23□□□□□ -0.13
CLN8-204ENST00000519254 GPR1P46091 355 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 SH3BP2P78314 561 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 BTKQ06187 659 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 SGCGQ13326 291 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 ZNF648Q5T619 568 aaPredicted RBP14.23□□□□□ -0.13
CLN8-204ENST00000519254 FAM219BQ5XKK7 198 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLN8-204ENST00000519254 MAELQ96JY0 434 aaKnown RBP14.23□□□□□ -0.13
CLN8-204ENST00000519254 FAR2Q96K12 515 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 UHRF1Q96T88 793 aaPredicted RBP14.23□□□□□ -0.13
CLN8-204ENST00000519254 MYOCQ99972 504 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 CCDC28BQ9BUN5 200 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 C1QTNF3Q9BXJ4 246 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 PREBQ9HCU5 417 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 ITM2CQ9NQX7 267 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 TAS2R1Q9NYW7 299 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 USP36Q9P275 1121 aaKnown RBP14.23□□□□□ -0.13
CLN8-204ENST00000519254 MBD1Q9UIS9 605 aaPredicted RBP14.23□□□□□ -0.13
CLN8-204ENST00000519254 CDYLQ9Y232 598 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 TRAF6Q9Y4K3 522 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 NUMA1Q14980 2115 aa14.23□□□□□ -0.13
CLN8-204ENST00000519254 NCF1BA6NI72 391 aaPredicted RBP14.22□□□□□ -0.13
CLN8-204ENST00000519254 TRPC5OSA6NMA1 111 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms