RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 ZFYVE27Q5T4F4 411 aa11.38□□□□□ -0.59
TMEM55A-202ENST00000518359 CCDC183Q5T5S1 534 aa11.38□□□□□ -0.59
TMEM55A-202ENST00000518359 NCBP2-AS2Q69YL0 99 aa11.38□□□□□ -0.59
TMEM55A-202ENST00000518359 CCDC70Q6NSX1 233 aa11.38□□□□□ -0.59
TMEM55A-202ENST00000518359 IRF2BP2Q7Z5L9 587 aa11.38□□□□□ -0.59
TMEM55A-202ENST00000518359 ZNF830Q96NB3 372 aaPredicted RBP11.38□□□□□ -0.59
TMEM55A-202ENST00000518359 C1GALT1Q9NS00 363 aa11.38□□□□□ -0.59
TMEM55A-202ENST00000518359 GPN3Q9UHW5 284 aaPredicted RBP11.38□□□□□ -0.59
TMEM55A-202ENST00000518359 MYO6Q9UM54 1294 aa11.38□□□□□ -0.59
TMEM55A-202ENST00000518359 DNMT3AQ9Y6K1 912 aaPredicted RBP11.38□□□□□ -0.59
TMEM55A-202ENST00000518359 NF1P21359 2839 aa11.38□□□□□ -0.59
TMEM55A-202ENST00000518359 AKAP9Q99996 3911 aa11.38□□□□□ -0.59
TMEM55A-202ENST00000518359 ANKRD12Q6UB98 2062 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 ZFHX3Q15911 3703 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 SLC9B1P1A6NJY1 282 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 E7EQ34 232 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 POP7O75817 140 aaKnown RBP11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 LCA5LO95447 670 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 PIRTP0C851 137 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 BPIP17213 487 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 HLA-DPA1P20036 260 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 NDUFS1P28331 727 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 SOX8P57073 446 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 SLC25A11Q02978 314 aaKnown RBP11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 MMRN1Q13201 1228 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 CYP2A13Q16696 494 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 KRTAP21-3Q3LHN1 58 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 ATP13A5Q4VNC0 1218 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 LDLRAP1Q5SW96 308 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 TXNRD3NBQ6F5E7 133 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 GPR135Q8IZ08 494 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 NIPA2Q8N8Q9 360 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 CCNYQ8ND76 341 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 OR1L3Q8NH93 324 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 PPP4R1Q8TF05 950 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 HDAC11Q96DB2 347 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 C12orf66Q96MD2 445 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 AGAP3Q96P47 875 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 NUP62CLQ9H1M0 184 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 KIR3DX1Q9H7L2 352 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 ATP13A2Q9NQ11 1180 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 FANCLQ9NW38 375 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 P4HTMQ9NXG6 502 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 LIMA1Q9UHB6 759 aaKnown RBP11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 IP6K2Q9UHH9 426 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 SLC24A2Q9UI40 661 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 POMT2Q9UKY4 750 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 NOVA2Q9UNW9 492 aaKnown RBP11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 KLF2Q9Y5W3 355 aaPredicted RBP11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 CFAP20Q9Y6A4 193 aaKnown RBP11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 COLEC10Q9Y6Z7 277 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 DOCK10Q96BY6 2186 aa11.37□□□□□ -0.59
TMEM55A-202ENST00000518359 A0A1W2PQJ5 194 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 KLHL33A6NCF5 533 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 E2F3O00716 465 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 KLF7O75840 302 aaPredicted RBP11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 STSP08842 583 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 CD48P09326 243 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 SLC35G4P0C7Q5 338 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 POLR2CP19387 275 aaPredicted RBP11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 CA5AP35218 305 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 SSR1P43307 286 aaKnown RBP11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 TSFMP43897 325 aaKnown RBP11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 ARCN1P48444 511 aaKnown RBP11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 CDC16Q13042 620 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 ART3Q13508 389 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 NFE2L1Q14494 772 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 KRT33BQ14525 404 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 ASIC2Q16515 512 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 HADHQ16836 314 aaKnown RBP11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 ZNF789Q5FWF6 425 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 IRAK1BP1Q5VVH5 260 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 MLIPQ5VWP3 458 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 ZDHHC20Q5W0Z9 365 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 METRNLQ641Q3 311 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 B3GNTL1Q67FW5 361 aaPredicted RBP11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 FCRL6Q6DN72 434 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 FBXO38Q6PIJ6 1188 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 FAM83HQ6ZRV2 1179 aaPredicted RBP11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 B4GALNT4Q76KP1 1039 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 FJX1Q86VR8 437 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 FAM71BQ8TC56 605 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 GRHL3Q8TE85 626 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 FAR1Q8WVX9 515 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 N4BP2L2Q92802 583 aaPredicted RBP11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 LURAP1Q96LR2 239 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 TRAPPC9Q96Q05 1148 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 TRIB3Q96RU7 358 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 ZNF670Q9BS34 389 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 CBX8Q9HC52 389 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 CHST11Q9NPF2 352 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.36□□□□□ -0.594e-8■■■■□ 20.6
TMEM55A-202ENST00000518359 NDOR1Q9UHB4 597 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 ACSL5Q9ULC5 683 aa11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 PTRH2Q9Y3E5 179 aaKnown RBP11.36□□□□□ -0.59
TMEM55A-202ENST00000518359 MYO7BQ6PIF6 2116 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 GSAPA4D1B5 854 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 OR2AG2A6NM03 316 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 KCNK1O00180 336 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 DDX3YO15523 660 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms