RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 GPATCH4Q5T3I0 446 aaKnown RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 TIGD7Q6NT04 549 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF517Q6ZMY9 492 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZER1Q7Z7L7 766 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 SGMS1Q86VZ5 419 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 RASAL3Q86YV0 1011 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 CDKL3Q8IVW4 592 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 C8orf59Q8N0T1 100 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 CYP4Z2PQ8N1L4 340 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 PPM1KQ8N3J5 372 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZCCHC9Q8N567 271 aaKnown RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 DHRSXQ8N5I4 330 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 Q8N9G6 341 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 CAMKVQ8NCB2 501 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 MCUQ8NE86 351 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 RP9Q8TA86 221 aaKnown RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 MZB1Q8WU39 189 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ST8SIA4Q92187 359 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 TANKQ92844 425 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 E2F7Q96AV8 911 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 LURAP1Q96LR2 239 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 FOPNLQ96NB1 174 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 PPP1R2P1Q96PQ5 205 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 UHRF1Q96T88 793 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 DPYSL5Q9BPU6 564 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 C7orf25Q9BPX7 421 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 SEC22CQ9BRL7 303 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 BDH2Q9BUT1 245 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 GSDMCQ9BYG8 508 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 LRRC2Q9BYS8 371 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 CCDC90BQ9GZT6 254 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ALX4Q9H161 411 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 SPNS1Q9H2V7 528 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 OR51M1Q9H341 326 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 SAV1Q9H4B6 383 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 KLHL31Q9H511 634 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 COPS7BQ9H9Q2 264 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 NMUR1Q9HB89 426 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 MCCC2Q9HCC0 563 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 MRPS30Q9NP92 439 aaKnown RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ARHGEF4Q9NR80 690 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 FBXO6Q9NRD1 293 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 C19orf12Q9NSK7 152 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 MED9Q9NWA0 146 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 MCUBQ9NWR8 336 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ACTR10Q9NZ32 417 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ABCD2Q9UBJ2 740 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 WARS2Q9UGM6 360 aaKnown RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 MLXQ9UH92 298 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 SRP68Q9UHB9 627 aaKnown RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 NARFQ9UHQ1 456 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 CDH9Q9ULB4 789 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ING4Q9UNL4 249 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ABCG2Q9UNQ0 655 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 MGAT4BQ9UQ53 548 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 LIPT1Q9Y234 373 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ACOT9Q9Y305 439 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 NAALAD2Q9Y3Q0 740 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 MTF2Q9Y483 593 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 COL4A3BPQ9Y5P4 624 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 PEX16Q9Y5Y5 336 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 ACTL7AQ9Y615 435 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 AP1M2Q9Y6Q5 423 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLIT3O75094 1523 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 NID2Q14112 1375 aa4.75□□□□□ -1.65
HMGB1P19-201ENST00000517578 XDHP47989 1333 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 DLG5Q8TDM6 1919 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF609O15014 1411 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ADAMTS13Q76LX8 1427 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 RAB19A4D1S5 217 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 RGSL1A5PLK6 1076 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 OR6C74A6NCV1 312 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF729A6NN14 1252 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 A8MU76 341 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 H0YCG3 227 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 UBXN8O00124 270 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 BTN3A3O00478 584 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 NOP56O00567 594 aaKnown RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 TO15178 435 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC7A4O43246 635 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 PAPSS1O43252 624 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 HTRA2O43464 458 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 CIDEAO60543 219 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 RAD1O60671 282 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 EIF1BO60739 113 aaKnown RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF623O75123 536 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 MED24O75448 989 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 DDAH1O94760 285 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 IPO13O94829 963 aaKnown RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 VAPBO95292 243 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 CELF2O95319 508 aaKnown RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 GUCA1CO95843 209 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 FTH1P02794 183 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 SBK2P0C263 348 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 GNSP15586 552 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 TCF4P15884 667 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 XRCC1P18887 633 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 IL1R2P27930 398 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 PBLDP30039 288 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 IL13P35225 146 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms