RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 POLR1BQ9H9Y6 1135 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 FANCEQ9HB96 536 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 GBA2Q9HCG7 927 aaPredicted RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 SYTL2Q9HCH5 934 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 MAGEE1Q9HCI5 957 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 EPB41L5Q9HCM4 733 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 RANGRFQ9HD47 186 aaPredicted RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 KCNK9Q9NPC2 374 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 NGBQ9NPG2 151 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 CD93Q9NPY3 652 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRMT8Q9NR22 394 aaPredicted RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 TLR8Q9NR97 1041 aaKnown RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM114A2Q9NRY5 505 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC7A10Q9NS82 523 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 FARSBQ9NSD9 589 aaKnown RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 IARS2Q9NSE4 1012 aaKnown RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 CENPMQ9NSP4 180 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 C20orf141Q9NUB4 165 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 TCP11L1Q9NUJ3 509 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 OLAHQ9NV23 265 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM184CQ9NVA4 438 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 SETD4Q9NVD3 440 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 DNAJC17Q9NVM6 304 aaKnown RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 DDX18Q9NVP1 670 aaKnown RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM118AQ9NWS6 357 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 BABAM1Q9NWV8 329 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 SOHLH2Q9NX45 425 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 RAB20Q9NX57 234 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM161AQ9NX61 479 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 ETAA1Q9NY74 926 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 MTMR4Q9NYA4 1195 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLCO1C1Q9NYB5 712 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMOD3Q9NYL9 352 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 HAO2Q9NYQ3 351 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPG21Q9NZD8 308 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 CNIH4Q9P003 139 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 FOXJ2Q9P0K8 574 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 KIAA1456Q9P272 454 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 STK26Q9P289 416 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANKMY1Q9P2S6 941 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 PEMTQ9UBM1 199 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 HDAC6Q9UBN7 1215 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPASTQ9UBP0 616 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 HEY2Q9UBP5 337 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 HSPB7Q9UBY9 170 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 CLIP2Q9UDT6 1046 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZMAT5Q9UDW3 170 aaKnown RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 KLQ9UEF7 1012 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 CNOT8Q9UFF9 292 aaKnown RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 KCNN3Q9UGI6 736 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 FETUBQ9UGM5 382 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 FBXO40Q9UH90 709 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 SUN2Q9UH99 717 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 MAD2L2Q9UI95 211 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRMT6Q9UJA5 497 aaKnown RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC25A13Q9UJS0 675 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF580Q9UK33 172 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 GMEB2Q9UKD1 530 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 ITGA11Q9UKX5 1188 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 PSME2Q9UL46 239 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRPC5Q9UL62 973 aaPredicted RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 PADI1Q9ULC6 663 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 PLAGL1Q9UM63 463 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 GABRQQ9UN88 632 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 A4GNTQ9UNA3 340 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 SNX7Q9UNH6 387 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 SNX6Q9UNH7 406 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 DHDHQ9UQ10 334 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 CHMP2BQ9UQN3 213 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 RCE1Q9Y256 329 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 ITM2BQ9Y287 266 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 SSX2IPQ9Y2D8 614 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 DLGAP4Q9Y2H0 992 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 PLEKHA6Q9Y2H5 1048 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC27A6Q9Y2P4 619 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 MRPS7Q9Y2R9 242 aaKnown RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 KCNK7Q9Y2U2 307 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 MAP3K2Q9Y2U5 619 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 WBP11Q9Y2W2 641 aaKnown RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 AAR2Q9Y312 384 aaKnown RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 NOSIPQ9Y314 301 aaKnown RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 CHTOPQ9Y3Y2 248 aaKnown RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 CMAHPQ9Y471 501 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 ASB3Q9Y575 518 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 MAB21L2Q9Y586 359 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 PCDHB7Q9Y5E2 793 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 PCDHB2Q9Y5E7 798 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 PCDHAC2Q9Y5I4 1007 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 SNX9Q9Y5X1 595 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 TEX264Q9Y6I9 313 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC4A4Q9Y6R1 1079 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 CAPN7Q9Y6W3 813 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 U3KQV3 271 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 UBE4BO95155 1302 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 PNPLA7Q6ZV29 1317 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 WDR19Q8NEZ3 1342 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 KIF16BQ96L93 1317 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZMYM3Q14202 1370 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 KANK1Q14678 1352 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms