RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 C9orf66Q5T8R8 295 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 FAXCQ5TGI0 409 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 EFCAB2Q5VUJ9 269 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 CES4AQ5XG92 561 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 TBC1D3GQ6DHY5 549 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 TBC1D3CQ6IPX1 549 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 ZNF770Q6IQ21 691 aaPredicted RBP-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 CES5AQ6NT32 575 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 DUS1LQ6P1R4 473 aaKnown RBP-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 PACS1Q6VY07 963 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 TBC1D3Q8IZP1 549 aaPredicted RBP-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 TMEM57Q8N5G2 664 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 ZNF596Q8TC21 504 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 SETD7Q8WTS6 366 aaKnown RBP-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 MVB12AQ96EY5 273 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 DNAJC2Q99543 621 aaKnown RBP-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 MTMR12Q9C0I1 747 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 GPR88Q9GZN0 384 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 UBQLN3Q9H347 655 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 STON1Q9Y6Q2 735 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 A3GALT2U3KPV4 340 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 STAB1Q9NY15 2570 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 VWDEQ8N2E2 1590 aa-1□□□□□ -2.57
RNU6-542P-201ENST00000516405 FAM234BA2RU67 622 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 OR6C76A6NM76 312 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 C16orf90A8MZG2 172 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 KLRF2D3W0D1 207 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 J3QRE1 110 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 ATP6V0E1O15342 81 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 KLK8O60259 260 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 GPR137BO60478 399 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 IGHEP01854 428 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 ZKSCAN1P17029 563 aaPredicted RBP-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 ZNF8P17098 575 aaPredicted RBP-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 CD58P19256 250 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 CD22P20273 847 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 UGT1A1P22309 533 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 CCNE1P24864 410 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 PDHA2P29803 388 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 CDH11P55287 796 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 CLDN20P56880 219 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 CDK18Q07002 472 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 BLMHQ13867 455 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 CSHL1Q14406 222 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 PTPROQ16827 1216 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 GXYLT1Q4G148 440 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 KLHL26Q53HC5 615 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 ARHGAP15Q53QZ3 475 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 ZNF766Q5HY98 468 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 LYSMD4Q5XG99 296 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 RAP1GAP2Q684P5 730 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 KIAA0408Q6ZU52 694 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 CCDC28AQ8IWP9 274 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 FAM186BQ8IYM0 893 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 MARVELD2Q8N4S9 558 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 CERS5Q8N5B7 392 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 LINC01555Q8NAE3 123 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 VANGL1Q8TAA9 524 aaPredicted RBP-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 GDPD5Q8WTR4 605 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 KCNJ9Q92806 393 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 GRAMD1AQ96CP6 724 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 PPP1R16AQ96I34 528 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 SUCLG2Q96I99 432 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 RIPOR3Q96MK2 946 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 TMEM120AQ9BXJ8 343 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 B3GAT2Q9NPZ5 323 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 ZNF212Q9UDV6 495 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 ZNF337Q9Y3M9 751 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 CLCA3PQ9Y6N3 262 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 LRRK1Q38SD2 2015 aa-1.01□□□□□ -2.57
RNU6-542P-201ENST00000516405 TEX13DA0A0J9YY54 714 aaPredicted RBP-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 RBMY1BA6NDE4 496 aaKnown RBP-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 OR6C68A6NDL8 312 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 RBMY1EA6NEQ0 496 aaKnown RBP-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 AGAP5A6NIR3 686 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 RPL37AP8A6NKH3 93 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 HSPB2A8KAH6 182 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 J3KTA2 159 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 EBAG9O00559 213 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 OVOL1O14753 267 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 IRAK2O43187 625 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 SEC14L5O43304 696 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 N4BP1O75113 896 aaKnown RBP-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 VIPP01282 170 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 MT-ND5P03915 603 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 KRT19P08727 400 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 QDPRP09417 244 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 RBMY1DP0C7P1 496 aaKnown RBP-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 PECAM1P16284 738 aaPredicted RBP-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 MAGP20916 626 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 MAOAP21397 527 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 AVPR2P30518 371 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 GSK3BP49841 420 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 GPM6AP51674 278 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 THOP1P52888 689 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 ARSFP54793 590 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 CSNK2BP67870 215 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 KRT85P78386 507 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 KIAA0040Q15053 153 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 ZNF146Q15072 292 aa-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms