RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 CAPRIN2Q6IMN6 1127 aaKnown RBP10.96□□□□□ -0.65
SCARNA16.1-201ENST00000516133 CCDC137Q6PK04 289 aaKnown RBP10.96□□□□□ -0.65
SCARNA16.1-201ENST00000516133 PACS1Q6VY07 963 aa10.96□□□□□ -0.65
SCARNA16.1-201ENST00000516133 COG1Q8WTW3 980 aa10.96□□□□□ -0.65
SCARNA16.1-201ENST00000516133 C12orf66Q96MD2 445 aa10.96□□□□□ -0.65
SCARNA16.1-201ENST00000516133 ZNF778Q96MU6 729 aa10.96□□□□□ -0.65
SCARNA16.1-201ENST00000516133 INSM2Q96T92 566 aaPredicted RBP10.96□□□□□ -0.65
SCARNA16.1-201ENST00000516133 RAB33BQ9H082 229 aa10.96□□□□□ -0.65
SCARNA16.1-201ENST00000516133 WWP1Q9H0M0 922 aa10.96□□□□□ -0.65
SCARNA16.1-201ENST00000516133 CHRAC1Q9NRG0 131 aa10.96□□□□□ -0.65
SCARNA16.1-201ENST00000516133 IMP3Q9NV31 184 aaKnown RBP10.96□□□□□ -0.65
SCARNA16.1-201ENST00000516133 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.96□□□□□ -0.65
SCARNA16.1-201ENST00000516133 EPHA6Q9UF33 1036 aa10.96□□□□□ -0.65
SCARNA16.1-201ENST00000516133 SLC2A6Q9UGQ3 507 aa10.96□□□□□ -0.65
SCARNA16.1-201ENST00000516133 ANAPC5Q9UJX4 755 aa10.96□□□□□ -0.65
SCARNA16.1-201ENST00000516133 PCDHB11Q9Y5F2 797 aa10.96□□□□□ -0.65
SCARNA16.1-201ENST00000516133 CACNA1GO43497 2377 aa10.96□□□□□ -0.66
SCARNA16.1-201ENST00000516133 ZNF106Q9H2Y7 1883 aaKnown RBP10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 MGAQ8IWI9 3026 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 MN1Q10571 1320 aaPredicted RBP10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 PRAMEF33A0A0G2JMD5 474 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 MAGEB16A2A368 324 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 OR51F1A6NGY5 319 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 C9orf172C9J069 976 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 IFRD1O00458 451 aaPredicted RBP10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 CAPN5O15484 640 aaPredicted RBP10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 C9P02748 559 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 FTH1P02794 183 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 ANKRD34CP0C6C1 535 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 OR56A5P0C7T3 313 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 PRSS56P0CW18 603 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 ETV5P41161 510 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 CAPZBP47756 277 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 FNTAP49354 379 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 TTPAP49638 278 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 GNG11P61952 73 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 PLOD1Q02809 727 aaPredicted RBP10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 DCAF12Q5T6F0 453 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 TTC27Q6P3X3 843 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 FAM129CQ86XR2 697 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 SPDYE1Q8NFV5 336 aaPredicted RBP10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 GRK7Q8WTQ7 553 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 NAT14Q8WUY8 206 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 C9orf72Q96LT7 481 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 TEFMQ96QE5 360 aaKnown RBP10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 KIFC1Q9BW19 673 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 DDA1Q9BW61 102 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 COG4Q9H9E3 785 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 FBXO8Q9NRD0 319 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 SLC39A1Q9NY26 324 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 OGFRQ9NZT2 677 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 FAM8A1Q9UBU6 413 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 KLHL3Q9UH77 587 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 SSUH2Q9Y2M2 353 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 ADAMTS20P59510 1910 aa10.95□□□□□ -0.66
SCARNA16.1-201ENST00000516133 EFCAB7A8K855 629 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 LIN7AO14910 233 aaPredicted RBP10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 CD3EAPO15446 510 aaKnown RBP10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 PRAMEF10O60809 474 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 PHF2O75151 1096 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 MLNP12872 115 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 VPS41P49754 854 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 TMPRSS3P57727 454 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 CRADDP78560 199 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 MC2RQ01718 297 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 CLN3Q13286 438 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 KCNJ11Q14654 390 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 PLCL1Q15111 1095 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 ZNF658BQ4V348 819 aaPredicted RBP10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 ZNF534Q76KX8 674 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 PDZD3Q86UT5 571 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 MPP5Q8N3R9 675 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 MCUQ8NE86 351 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 ART4Q93070 314 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 TGM7Q96PF1 710 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 ZPBPQ9BS86 351 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 OR52A5Q9H2C5 316 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 KIR3DX1Q9H7L2 352 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 MRM3Q9HC36 420 aaKnown RBP10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 XAB2Q9HCS7 855 aaKnown RBP10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 TREX1Q9NSU2 369 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 CATSPERZQ9NTU4 200 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 HRASLS2Q9NWW9 162 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 OCIAD1Q9NX40 245 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 SLC24A2Q9UI40 661 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 NEU2Q9Y3R4 380 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 CFAP20Q9Y6A4 193 aaKnown RBP10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 PIKFYVEQ9Y2I7 2098 aa10.94□□□□□ -0.66
SCARNA16.1-201ENST00000516133 TCRBV7S3A2A0A539 114 aa10.93□□□□□ -0.66
SCARNA16.1-201ENST00000516133 SDR42E2A6NKP2 422 aa10.93□□□□□ -0.66
SCARNA16.1-201ENST00000516133 USP27XA6NNY8 438 aa10.93□□□□□ -0.66
SCARNA16.1-201ENST00000516133 STMND1H3BQB6 276 aa10.93□□□□□ -0.66
SCARNA16.1-201ENST00000516133 PFDN6O15212 129 aa10.93□□□□□ -0.66
SCARNA16.1-201ENST00000516133 ZNF185O15231 689 aa10.93□□□□□ -0.66
SCARNA16.1-201ENST00000516133 RASSF9O75901 435 aa10.93□□□□□ -0.66
SCARNA16.1-201ENST00000516133 LIPCP11150 499 aa10.93□□□□□ -0.66
SCARNA16.1-201ENST00000516133 MGAT1P26572 445 aa10.93□□□□□ -0.66
SCARNA16.1-201ENST00000516133 GFERP55789 205 aa10.93□□□□□ -0.66
SCARNA16.1-201ENST00000516133 PAPD7Q5XG87 772 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms