RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 TMEM159Q96B96 161 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SHDQ96IW2 340 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 FAR2Q96K12 515 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 RILPQ96NA2 401 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 LENG8Q96PV6 779 aaPredicted RBP7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 LRRC37BQ96QE4 947 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 EGFL8Q99944 293 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 C1QTNF3Q9BXJ4 246 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 C1QTNF2Q9BXJ5 285 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SLC17A9Q9BYT1 436 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 TRIM54Q9BYV2 358 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 OSBPL6Q9BZF3 934 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SHCBP1LQ9BZQ2 653 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 KDM4CQ9H3R0 1056 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 LMAN1LQ9HAT1 526 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 KCNK13Q9HB14 408 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 PHPT1Q9NRX4 125 aaPredicted RBP7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ABCF3Q9NUQ8 709 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 UTP6Q9NYH9 597 aaKnown RBP7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ATXN10Q9UBB4 475 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 HEY2Q9UBP5 337 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 FAM8A1Q9UBU6 413 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 VTI1BQ9UEU0 232 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ZDHHC2Q9UIJ5 367 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ADAMTS6Q9UKP5 1117 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 FBXL21Q9UKT6 434 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 GPR34Q9UPC5 381 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ZFR2Q9UPR6 939 aaKnown RBP7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 OARD1Q9Y530 152 aa7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 TNPO3Q9Y5L0 923 aaKnown RBP7.5□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SLC5A10A0PJK1 596 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 TMEM202A6NGA9 273 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 LRRC14BA6NHZ5 514 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 LRRC72A6NJI9 287 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CHURC1-FNTBB4DL54 471 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 GPR89AB7ZAQ6 455 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 MATN2O00339 956 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ZNF195O14628 629 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 LIN7AO14910 233 aaPredicted RBP7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 HGSO14964 777 aaPredicted RBP7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SLC16A5O15375 505 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 HDAC3O15379 428 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 DIAPH2O60879 1101 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 GPC4O75487 556 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SLCO2B1O94956 709 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 GUCA1CO95843 209 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 HIST1H2AGP0C0S8 130 aaPredicted RBP7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 GPR89BP0CG08 455 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ZNF8P17098 575 aaPredicted RBP7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 TSPAN8P19075 237 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 HIST1H2ADP20671 130 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CYP2A7P20853 494 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 TARSP26639 723 aaKnown RBP7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SERPINB3P29508 390 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 MAT2AP31153 395 aaKnown RBP7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 MAPK9P45984 424 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 AGTR2P50052 363 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 IDH3AP50213 366 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 TPMTP51580 245 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CCR3P51677 355 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CDH13P55290 713 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CLCQ05315 142 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ZP2Q05996 745 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 LCP2Q13094 533 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SP140Q13342 867 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 FGL2Q14314 439 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 INPP5AQ14642 412 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 UBXN2BQ14CS0 331 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 PHKG1Q16816 387 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 HABP4Q5JVS0 413 aaKnown RBP7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CDKL4Q5MAI5 379 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SH2D4BQ5SQS7 431 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SULT1C3Q6IMI6 304 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 DOK6Q6PKX4 331 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 Q6ZS52 159 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 UBE2R2Q712K3 238 aaPredicted RBP7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 RPS27LQ71UM5 84 aaKnown RBP7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SYT13Q7L8C5 426 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 YTHDF3Q7Z739 585 aaKnown RBP7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CUZD1Q86UP6 607 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 VRK3Q8IV63 474 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ZNF687Q8N1G0 1237 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 FITM2Q8N6M3 262 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 GBP7Q8N8V2 638 aaPredicted RBP7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 TP53I13Q8NBR0 393 aaPredicted RBP7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 PDPRQ8NCN5 879 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 OR2T34Q8NGX1 318 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ZNF483Q8TF39 744 aaPredicted RBP7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 HMGB4Q8WW32 186 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ASB12Q8WXK4 309 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CCT6BQ92526 530 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SKA1Q96BD8 255 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 HIST1H2AHQ96KK5 128 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 LINC00615Q96LM1 132 aaPredicted RBP7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 NELL2Q99435 816 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 HIST1H2AJQ99878 128 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 H2AFJQ9BTM1 129 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SLC12A9Q9BXP2 914 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 TEX101Q9BY14 249 aa7.49□□□□□ -1.21
SCARNA20.1-201ENST00000516009 BTBD1Q9H0C5 482 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms