RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 REM1O75628 298 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 GLSO94925 669 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 TGFAP01135 160 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 KRT8P05787 483 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 SLC3A2P08195 630 aaKnown RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 KRT19P08727 400 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 JMJD7P0C870 316 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 LYNX1P0DP58 116 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 PDIA4P13667 645 aaKnown RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 ALADP13716 330 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 HLA-DOBP13765 273 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 MTHFD2P13995 350 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 MDKP21741 143 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 CA6P23280 308 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 FCARP24071 287 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 EPHA3P29320 983 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 AXLP30530 894 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 MAN1A1P33908 653 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 GP5P40197 560 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 PRKCIP41743 596 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 FNTAP49354 379 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 AARSP49588 968 aaKnown RBP eCLIP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 MCM2P49736 904 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 STK19P49842 368 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 ZNF136P52737 540 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 SNRPD1P62314 119 aaKnown RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 MEF2CQ06413 473 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 CNTN1Q12860 1018 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 SPP2Q13103 211 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 DAG1Q14118 895 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 ACOX1Q15067 660 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 ZMYND11Q15326 602 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 SNRNP35Q16560 246 aaKnown RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 ESRGQ1W209 222 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 VWC2Q2TAL6 325 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 ALKBH6Q3KRA9 238 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 TTC31Q49AM3 519 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 MCMDC2Q4G0Z9 681 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 SOHLH1Q5JUK2 328 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 PDSS1Q5T2R2 415 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 BROXQ5VW32 411 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 ANKRD22Q5VYY1 191 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 OLFML2AQ68BL7 652 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 CDCA2Q69YH5 1023 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 C22orf42Q6IC83 251 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 FAM109BQ6ICB4 259 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 PLBD1Q6P4A8 553 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 SLC4A10Q6U841 1118 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 UNQ9370/PRO34162Q6UXP9 181 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 DGAT2L6Q6ZPD8 337 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 LINC00696Q6ZRV3 163 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 MSANTD1Q6ZTZ1 278 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 CHST15Q7LFX5 561 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 NLRP9Q7RTR0 991 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 TIPARPQ7Z3E1 657 aaKnown RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 PCGF5Q86SE9 256 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 HERC6Q8IVU3 1022 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 SUGP1Q8IWZ8 645 aaKnown RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 METTL25Q8N6Q8 603 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 C15orf56Q8N910 161 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 HSD17B11Q8NBQ5 300 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 OR52N4Q8NGI2 321 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 SPATA22Q8NHS9 363 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 LINC01006Q8NI28 216 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 WFDC5Q8TCV5 224 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 BPIFB1Q8TDL5 484 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 ZFP90Q8TF47 636 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 HNRNPLLQ8WVV9 542 aaKnown RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 NCSTNQ92542 709 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 TANKQ92844 425 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 SEMA4DQ92854 862 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 KAT5Q92993 513 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 ABTB1Q969K4 478 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 TOMM40LQ969M1 308 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 HVCN1Q96D96 273 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 GIMAP5Q96F15 307 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 ZC2HC1AQ96GY0 325 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 TIMD4Q96H15 378 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 SLC39A13Q96H72 371 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 GPATCH3Q96I76 525 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 EGLN2Q96KS0 407 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 BMFQ96LC9 184 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 C3orf30Q96M34 536 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 ZNF641Q96N77 438 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 C20orf166-AS1Q96NR2 134 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 GFM1Q96RP9 751 aaKnown RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 EYA3Q99504 573 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 SMAD5Q99717 465 aaKnown RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 MMTAG2Q9BU76 263 aaKnown RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 C1orf43Q9BWL3 253 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 TRIM2Q9C040 744 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 SLC39A8Q9C0K1 460 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 POLR1EQ9GZS1 481 aaKnown RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 TMEM245Q9H330 911 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 DHX35Q9H5Z1 703 aaKnown RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 GNB4Q9HAV0 340 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 SH2D2AQ9NP31 389 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 MYOZ1Q9NP98 299 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 PRSS16Q9NQE7 514 aa-0.69□□□□□ -2.52
SCARNA21.1-201ENST00000515996 METTL5Q9NRN9 209 aaKnown RBP-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms