RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	ACAD10	Q6JQN1	1059 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	PPP1R32	Q7Z5V6	425 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	MRGPRG	Q86SM5	289 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	ZNF295-AS1	Q8N0V1	137 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	CARF	Q8N187	725 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	GDAP1	Q8TB36	358 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	CCDC120	Q96HB5	630 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	ATP13A2	Q9NQ11	1180 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	RBM22	Q9NW64	420 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	TAS2R14	Q9NYV8	317 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	GPN3	Q9UHW5	284 aa	Predicted RBP	10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	MDC1	Q14676	2089 aa	Known RBP	10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620		A0A1B0GTL3	188 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	TMEM191C	A6NGB0	347 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	TMCO5B	A8MYB1	307 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620		E7EQ34	232 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	PRICKLE3	O43900	615 aa	Predicted RBP	10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	HLA-DQB2	P05538	268 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	ATP1A3	P13637	1013 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	TCF4	P15884	667 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	POLR2C	P19387	275 aa	Predicted RBP	10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	HLA-DPA1	P20036	260 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	PBLD	P30039	288 aa	Predicted RBP	10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	CD86	P42081	329 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	LMAN1	P49257	510 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	SOX8	P57073	446 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	OTUD4	Q01804	1114 aa	Known RBP	10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	AIMP2	Q13155	320 aa	Known RBP	10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	TCP11X2	Q5H9J9	407 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	ZFYVE27	Q5T4F4	411 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	C1orf189	Q5VU69	101 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	PLEKHA7	Q6IQ23	1121 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	B4GALNT4	Q76KP1	1039 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	AMZ2	Q86W34	360 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	BCORP1	Q8N888	145 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	COG1	Q8WTW3	980 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	MAML1	Q92585	1016 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	MAGEB10	Q96LZ2	347 aa	Predicted RBP	10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	C17orf62	Q9BQA9	187 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	ADGRE3	Q9BY15	652 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	SYTL2	Q9HCH5	934 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	SAMSN1	Q9NSI8	373 aa	Known RBP	10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	HAUS2	Q9NVX0	235 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	SLC24A2	Q9UI40	661 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	SERTAD3	Q9UJW9	196 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	FBXL4	Q9UKA2	621 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	POMT2	Q9UKY4	750 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	TMPRSS11E	Q9UL52	423 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	ZGRF1	Q86YA3	2104 aa		10.19	□□□□□ -0.78
CLDND1-231	ENST00000515620	TRGV8	A0A0C4DH27	118 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	CCDC78	A2IDD5	438 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	GSAP	A4D1B5	854 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	MATN3	O15232	486 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	KCNN4	O15554	427 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	NADK	O95544	446 aa	Predicted RBP	10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	HBQ1	P09105	142 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	CBSL	P0DN79	551 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	ST6GAL1	P15907	406 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	HOXB4	P17483	251 aa	Predicted RBP	10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	EEF1G	P26641	437 aa	Known RBP	10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	CBS	P35520	551 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	TDGF1P3	P51864	188 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	DMPK	Q09013	629 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	TMEM115	Q12893	351 aa	Predicted RBP	10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	PRKAA1	Q13131	559 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	NFE2L1	Q14494	772 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	SLC9A5	Q14940	896 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	TLR1	Q15399	786 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	DPCR1	Q3MIW9	517 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	AGAP7P	Q5VUJ5	663 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	IRAK1BP1	Q5VVH5	260 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	FCRL6	Q6DN72	434 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	TIGD7	Q6NT04	549 aa	Predicted RBP	10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	IGFL2	Q6UWQ7	119 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	LRRC49	Q8IUZ0	686 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	TMEM151B	Q8IW70	566 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	MMP21	Q8N119	569 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	OR2Y1	Q8NGV0	311 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	LRRN4	Q8WUT4	740 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	TTC25	Q96NG3	672 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	AGAP4	Q96P64	663 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	GPR63	Q9BZJ6	419 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	KLHL25	Q9H0H3	589 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	WWP1	Q9H0M0	922 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	KIR3DX1	Q9H7L2	352 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	PCDH18	Q9HCL0	1135 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	C1GALT1	Q9NS00	363 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	RAD18	Q9NS91	495 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	IFT80	Q9P2H3	777 aa	Predicted RBP	10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	FAM8A1	Q9UBU6	413 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	NDOR1	Q9UHB4	597 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	AMACR	Q9UHK6	382 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	SH3BGRL2	Q9UJC5	107 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	CDYL	Q9Y232	598 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	ZNF711	Q9Y462	761 aa		10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	ANKHD1	Q8IWZ3	2542 aa	Known RBP	10.18	□□□□□ -0.78
CLDND1-231	ENST00000515620	SPTB	P11277	2137 aa		10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms