RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 CDH3P22223 829 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 PRKCIP41743 596 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 HADHQ16836 314 aaKnown RBP19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 SPOCD1Q6ZMY3 1216 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 MRGPREQ86SM8 312 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 GALNT16Q8N428 558 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 BEND7Q8N7W2 519 aaPredicted RBP19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 SPDYE1Q8NFV5 336 aaPredicted RBP19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 SPATA22Q8NHS9 363 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 BRSK1Q8TDC3 778 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 NAT14Q8WUY8 206 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 IMP4Q96G21 291 aaKnown RBP19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 C12orf66Q96MD2 445 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 AGAP3Q96P47 875 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 BARD1Q99728 777 aaKnown RBP19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 SLC7A5P2Q9GIP4 190 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 ZNF552Q9H707 407 aaPredicted RBP19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 FAM8A1Q9UBU6 413 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 SLC24A2Q9UI40 661 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 ENTPD4Q9Y227 616 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 OSGIN2Q9Y236 505 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 C2CD3Q4AC94 2353 aa19.76■□□□□ 0.75
SQSTM1-215ENST00000514093 MT-CYBP00156 380 aaPredicted RBP19.76■□□□□ 0.75
SQSTM1-215ENST00000514093 IFI35P80217 286 aaPredicted RBP19.76■□□□□ 0.75
SQSTM1-215ENST00000514093 MYBPC3Q14896 1274 aa19.76■□□□□ 0.75
SQSTM1-215ENST00000514093 IGFL3Q6UXB1 125 aa19.76■□□□□ 0.75
SQSTM1-215ENST00000514093 NT5DC3Q86UY8 548 aa19.76■□□□□ 0.75
SQSTM1-215ENST00000514093 OR4E2Q8NGC2 313 aa19.76■□□□□ 0.75
SQSTM1-215ENST00000514093 ZNF670Q9BS34 389 aa19.76■□□□□ 0.75
SQSTM1-215ENST00000514093 CBX8Q9HC52 389 aa19.76■□□□□ 0.75
SQSTM1-215ENST00000514093 IL26Q9NPH9 171 aa19.76■□□□□ 0.75
SQSTM1-215ENST00000514093 PCDHGA10Q9Y5H3 936 aa19.76■□□□□ 0.75
SQSTM1-215ENST00000514093 MDC1Q14676 2089 aaKnown RBP19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 DIDO1Q9BTC0 2240 aaKnown RBP19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 KLF7O75840 302 aaPredicted RBP19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 ALPPP05187 535 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 PREPP48147 710 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 PPIDQ08752 370 aaKnown RBP19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 AP1B1Q10567 949 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 NOMO1Q15155 1222 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 ANO6Q4KMQ2 910 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 DCAF10Q5QP82 559 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 MLIPQ5VWP3 458 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 METRNLQ641Q3 311 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 B4GALNT4Q76KP1 1039 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 DET1Q7L5Y6 550 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 MCEMP1Q8IX19 187 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 ZADH2Q8N4Q0 377 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 CLEC1AQ8NC01 280 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 ST6GALNAC3Q8NDV1 305 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 KLHL25Q9H0H3 589 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 UBP1Q9NZI7 540 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 CSAG2Q9Y5P2 127 aa19.75■□□□□ 0.75
SQSTM1-215ENST00000514093 C9J4A7 227 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 MYO1FO00160 1098 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 ZG16O60844 167 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 HLA-DPA1P20036 260 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 LMAN1P49257 510 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 FOXL2P58012 376 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 TAS2R40P59535 323 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 PRKAA1Q13131 559 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 PDK2Q15119 407 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 ZRSR2Q15696 482 aaKnown RBP19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 FNBP1LQ5T0N5 605 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 CCDC70Q6NSX1 233 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 FAM151BQ6UXP7 276 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 Q6ZS92 163 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 KCNMB4Q86W47 210 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 TMEM151BQ8IW70 566 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 FAF2Q96CS3 445 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 FER1L6-AS2Q96M78 137 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 NRTNQ99748 197 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 KIR3DX1Q9H7L2 352 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 AGPAT4Q9NRZ5 378 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 TMEM63CQ9P1W3 806 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 HEY1Q9Y5J3 304 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 POLEQ07864 2286 aa19.74■□□□□ 0.75
SQSTM1-215ENST00000514093 GSAPA4D1B5 854 aa19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 ZNF749O43361 778 aa19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 PMPCBO75439 489 aa19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 NDST3O95803 873 aa19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 ST6GAL1P15907 406 aa19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 AGXTP21549 392 aa19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 ADCY2Q08462 1091 aa19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 SSPNQ14714 243 aa19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 PPP2R5EQ16537 467 aa19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 CARFQ8N187 725 aa19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 TADA1Q96BN2 335 aa19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 ZNF830Q96NB3 372 aaPredicted RBP19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 ZCCHC2Q9C0B9 1178 aaKnown RBP19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 SLC25A51Q9H1U9 297 aa19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 C1GALT1Q9NS00 363 aa19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 SERTAD3Q9UJW9 196 aa19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 POMT2Q9UKY4 750 aa19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 PADI2Q9Y2J8 665 aa19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 DNMT3AQ9Y6K1 912 aaPredicted RBP19.73■□□□□ 0.75
SQSTM1-215ENST00000514093 CSMD2Q7Z408 3487 aa19.72■□□□□ 0.75
SQSTM1-215ENST00000514093 PRSS44E7EML9 344 aa19.72■□□□□ 0.75
SQSTM1-215ENST00000514093 PEX12O00623 359 aa19.72■□□□□ 0.75
SQSTM1-215ENST00000514093 BUD23O43709 281 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms