RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 E7EQ34 232 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 MASP2O00187 686 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 ZNF749O43361 778 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 LDB2O43679 373 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 POP7O75817 140 aaKnown RBP10.63□□□□□ -0.71
DDX41-216ENST00000513562 HBQ1P09105 142 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 CD48P09326 243 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 PREPP48147 710 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 ARCN1P48444 511 aaKnown RBP10.63□□□□□ -0.71
DDX41-216ENST00000513562 CTSCP53634 463 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 UBE2HP62256 183 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 MMRN1Q13201 1228 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 XRCC4Q13426 336 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 BECN1Q14457 450 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 NFE2L1Q14494 772 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 HIF1AQ16665 826 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 B3GNTL1Q67FW5 361 aaPredicted RBP10.63□□□□□ -0.71
DDX41-216ENST00000513562 DUS1LQ6P1R4 473 aaKnown RBP10.63□□□□□ -0.71
DDX41-216ENST00000513562 IGFL2Q6UWQ7 119 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 SPNS3Q6ZMD2 512 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 PPP1R32Q7Z5V6 425 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 OR2Y1Q8NGV0 311 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 FAM71BQ8TC56 605 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 ENOX1Q8TC92 643 aaKnown RBP10.63□□□□□ -0.71
DDX41-216ENST00000513562 BRSK1Q8TDC3 778 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 ITLN2Q8WWU7 325 aaPredicted RBP10.63□□□□□ -0.71
DDX41-216ENST00000513562 POM121Q96HA1 1249 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 AGAP3Q96P47 875 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 INSM2Q96T92 566 aaPredicted RBP10.63□□□□□ -0.71
DDX41-216ENST00000513562 GPR63Q9BZJ6 419 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 TRIM8Q9BZR9 551 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 XPO4Q9C0E2 1151 aaKnown RBP10.63□□□□□ -0.71
DDX41-216ENST00000513562 KIR3DX1Q9H7L2 352 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 SLC24A2Q9UI40 661 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 ITGB1BP2Q9UKP3 347 aa10.63□□□□□ -0.71
DDX41-216ENST00000513562 PTRH2Q9Y3E5 179 aaKnown RBP10.63□□□□□ -0.71
DDX41-216ENST00000513562 LGALS16A8MUM7 142 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 MATN2O00339 956 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 FTLP02792 175 aaPredicted RBP10.62□□□□□ -0.71
DDX41-216ENST00000513562 GZMAP12544 262 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 POLR2CP19387 275 aaPredicted RBP10.62□□□□□ -0.71
DDX41-216ENST00000513562 HLA-DPA1P20036 260 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 CDH3P22223 829 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 FOLR3P41439 243 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 OTUD4Q01804 1114 aaKnown RBP10.62□□□□□ -0.71
DDX41-216ENST00000513562 PRKAA1Q13131 559 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 AIMP2Q13155 320 aaKnown RBP10.62□□□□□ -0.71
DDX41-216ENST00000513562 KRT81Q14533 505 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 ZNF169Q14929 603 aaPredicted RBP10.62□□□□□ -0.71
DDX41-216ENST00000513562 CCDC122Q5T0U0 273 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 CCDC183Q5T5S1 534 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 METRNLQ641Q3 311 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 FCRL6Q6DN72 434 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 BNC2Q6ZN30 1099 aaPredicted RBP10.62□□□□□ -0.71
DDX41-216ENST00000513562 B4GALNT4Q76KP1 1039 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 NXPE1Q8N323 547 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 RASGEF1AQ8N9B8 481 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 GDAP1Q8TB36 358 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 LRRN4Q8WUT4 740 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 C12orf66Q96MD2 445 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 TTC25Q96NG3 672 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 GBP5Q96PP8 586 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 ERGIC2Q96RQ1 377 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 PITPNM3Q9BZ71 974 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 ZCCHC2Q9C0B9 1178 aaKnown RBP10.62□□□□□ -0.71
DDX41-216ENST00000513562 SLC7A5P2Q9GIP4 190 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 CLSTN2Q9H4D0 955 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 MRPL47Q9HD33 250 aaKnown RBP10.62□□□□□ -0.71
DDX41-216ENST00000513562 CHST11Q9NPF2 352 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 ATP13A2Q9NQ11 1180 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 SERTAD3Q9UJW9 196 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 DNMT3AQ9Y6K1 912 aaPredicted RBP10.62□□□□□ -0.71
DDX41-216ENST00000513562 MTORP42345 2549 aa10.62□□□□□ -0.71
DDX41-216ENST00000513562 AURKAO14965 403 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 CNOT3O75175 753 aaKnown RBP10.61□□□□□ -0.71
DDX41-216ENST00000513562 MYBL1P10243 752 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 COX6B1P14854 86 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 ST6GAL1P15907 406 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 MX2P20592 715 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 HTR1EP28566 365 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 LMAN1P49257 510 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 ARSEP51690 589 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 CDC16Q13042 620 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 PIGHQ14442 188 aaPredicted RBP10.61□□□□□ -0.71
DDX41-216ENST00000513562 CYP2A13Q16696 494 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 ZNF630Q2M218 657 aaPredicted RBP10.61□□□□□ -0.71
DDX41-216ENST00000513562 MLIPQ5VWP3 458 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 FAM180AQ6UWF9 173 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 PARP9Q8IXQ6 854 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 CNTD1Q8N815 330 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 NIPA2Q8N8Q9 360 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 DDHD1Q8NEL9 900 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 DNAJB14Q8TBM8 379 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 DTX3LQ8TDB6 740 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 HDAC11Q96DB2 347 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 TRIM11Q96F44 468 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 WWP1Q9H0M0 922 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 OLAHQ9NV23 265 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 MYO1AQ9UBC5 1043 aa10.61□□□□□ -0.71
DDX41-216ENST00000513562 OR2AG2A6NM03 316 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms