RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 DDX60Q8IY21 1712 aaKnown RBP4.2□□□□□ -1.74
HTT-210ENST00000512909 ANKRD36CQ5JPF3 1778 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 LOC100509620A0A075B734 347 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 CCL15-CCL14A0A0B4J2E2 113 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 SYNDIG1LA6NDD5 238 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 WNT9BO14905 357 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 TMCC2O75069 709 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 FGF2P09038 288 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 ANXA7P20073 488 aaKnown RBP4.19□□□□□ -1.74
HTT-210ENST00000512909 TNFRSF1BP20333 461 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 MAOAP21397 527 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 NNMTP40261 264 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 SLC15A1P46059 708 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 NRIP1P48552 1158 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 PDE1BQ01064 536 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 CRYZQ08257 329 aaKnown RBP4.19□□□□□ -1.74
HTT-210ENST00000512909 KCTD2Q14681 263 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 CCL15Q16663 113 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 MYLK3Q32MK0 819 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 PCGF3Q3KNV8 242 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 LEXMQ3ZCV2 418 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 RAB41Q5JT25 222 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 C20orf194Q5TEA3 1177 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 IRAK1BP1Q5VVH5 260 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 PLEKHA7Q6IQ23 1121 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 MTSS1LQ765P7 747 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 SDCCAG8Q86SQ7 713 aaPredicted RBP4.19□□□□□ -1.74
HTT-210ENST00000512909 GSDMBQ8TAX9 411 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 IGSF8Q969P0 613 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 ABHD8Q96I13 439 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 ZBED3Q96IU2 234 aaPredicted RBP4.19□□□□□ -1.74
HTT-210ENST00000512909 TM6SF1Q9BZW5 370 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 BOLA2Q9H3K6 86 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 PDZD7Q9H5P4 517 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 ACSS1Q9NUB1 689 aaPredicted RBP4.19□□□□□ -1.74
HTT-210ENST00000512909 AATFQ9NY61 560 aaKnown RBP eCLIP4.19□□□□□ -1.74
HTT-210ENST00000512909 SUCLA2Q9P2R7 463 aaPredicted RBP4.19□□□□□ -1.74
HTT-210ENST00000512909 AGO1Q9UL18 857 aaKnown RBP4.19□□□□□ -1.74
HTT-210ENST00000512909 CMAHPQ9Y471 501 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 RAI2Q9Y5P3 530 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 NFS1Q9Y697 457 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 ZHX2Q9Y6X8 837 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 LAMB2P55268 1798 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 DUOX1Q9NRD9 1551 aa4.19□□□□□ -1.74
HTT-210ENST00000512909 SCN4AP35499 1836 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 GOLGA6L9A6NEM1 432 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 A8MZ25 164 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 IFNL4K9M1U5 179 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 M0QZ24 198 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 SLC16A5O15375 505 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 AHCYL1O43865 530 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 GAGE7O76087 117 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 BEST1O76090 585 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 CENPBP07199 599 aaPredicted RBP4.18□□□□□ -1.74
HTT-210ENST00000512909 GAGE12FP0CL80 117 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 GAGE12GP0CL81 117 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 GAGE12IP0CL82 117 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 CETPP11597 493 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 LMO1P25800 156 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 PON1P27169 355 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 HOXA13P31271 388 aaPredicted RBP4.18□□□□□ -1.74
HTT-210ENST00000512909 MSH2P43246 934 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 CLCNKAP51800 687 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 STAT2P52630 851 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 TAS2R40P59535 323 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 DYNLL1P63167 89 aaKnown RBP4.18□□□□□ -1.74
HTT-210ENST00000512909 EGR4Q05215 589 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 GAGE1Q13065 139 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 GAGE4Q13068 117 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 VGLL4Q14135 290 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 C15orf59Q2T9L4 293 aaPredicted RBP4.18□□□□□ -1.74
HTT-210ENST00000512909 CDONQ4KMG0 1287 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 ZNF805Q5CZA5 627 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 KCNT1Q5JUK3 1230 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 KIAA0930Q6ICG6 404 aaPredicted RBP4.18□□□□□ -1.74
HTT-210ENST00000512909 JADE1Q6IE81 842 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 CREB3L2Q70SY1 520 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 ENOSF1Q7L5Y1 443 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 IQCF1Q8N6M8 205 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 PRR26Q8N8Z3 221 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 OR1J2Q8NGS2 313 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 TMED6Q8WW62 240 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 ERLEC1Q96DZ1 483 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 ZNF48Q96MX3 618 aaPredicted RBP4.18□□□□□ -1.74
HTT-210ENST00000512909 GAD1Q99259 594 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 MTERF1Q99551 399 aaKnown RBP4.18□□□□□ -1.74
HTT-210ENST00000512909 DNAJC18Q9H819 358 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 CHMP1AQ9HD42 196 aaPredicted RBP4.18□□□□□ -1.74
HTT-210ENST00000512909 PIH1D3Q9NQM4 214 aaKnown RBP4.18□□□□□ -1.74
HTT-210ENST00000512909 SLC35C2Q9NQQ7 365 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 PSD3Q9NYI0 1048 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 SLC9A2Q9UBY0 812 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 PCDHA7Q9UN72 937 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 SLC45A1Q9Y2W3 748 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 TRIM17Q9Y577 477 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 DICER1Q9UPY3 1922 aaKnown RBP4.18□□□□□ -1.74
HTT-210ENST00000512909 LTBP1Q14766 1721 aa4.18□□□□□ -1.74
HTT-210ENST00000512909 GPR75-ASB3A0A0A6YYF3 556 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 A0A1W2PQF6 199 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 MPHOSPH10O00566 681 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms