RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 MRFAP1L1Q96HT8 127 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 PANX2Q96RD6 677 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 MAP3K3Q99759 626 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 DPH2Q9BQC3 489 aaPredicted RBP12.27□□□□□ -0.45
VEGFA-216ENST00000512683 SLC25A23Q9BV35 468 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 KIR3DX1Q9H7L2 352 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 FANCEQ9HB96 536 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 ACSS2Q9NR19 701 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 C1GALT1Q9NS00 363 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 CUEDC1Q9NWM3 386 aaPredicted RBP12.27□□□□□ -0.45
VEGFA-216ENST00000512683 TRIM10Q9UDY6 481 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 BTRCQ9Y297 605 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 REXO2Q9Y3B8 237 aaKnown RBP12.27□□□□□ -0.45
VEGFA-216ENST00000512683 ZNF451Q9Y4E5 1061 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 EPN1Q9Y6I3 576 aaPredicted RBP12.27□□□□□ -0.45
VEGFA-216ENST00000512683 DUSP10Q9Y6W6 482 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 SOWAHDA6NJG2 315 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 UGT1A9O60656 530 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 SCRG1O75711 98 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 CEACAM4O75871 244 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 ANXA9O76027 345 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 SLC4A1P02730 911 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 CD63P08962 238 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 RALBP11234 206 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 UGT1A6P19224 532 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 NFKB1P19838 968 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 UGT1A1P22309 533 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 UGT1A4P22310 534 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 CTSCP53634 463 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 MLLT10P55197 1068 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 PRKAA1Q13131 559 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 LAMB3Q13751 1172 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 SPA17Q15506 151 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 TAF1AQ15573 450 aaPredicted RBP12.26□□□□□ -0.45
VEGFA-216ENST00000512683 BCL7AQ4VC05 210 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 MED25Q71SY5 747 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 GLT6D1Q7Z4J2 308 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 ZC3H18Q86VM9 953 aaKnown RBP12.26□□□□□ -0.45
VEGFA-216ENST00000512683 ZNF567Q8N184 647 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 TMEM102Q8N9M5 508 aaPredicted RBP12.26□□□□□ -0.45
VEGFA-216ENST00000512683 CPT1BQ92523 772 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 ZNF501Q96CX3 271 aaPredicted RBP12.26□□□□□ -0.45
VEGFA-216ENST00000512683 MRGPRX2Q96LB1 330 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 IP6K3Q96PC2 410 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 PPP1R2P1Q96PQ5 205 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 INSM2Q96T92 566 aaPredicted RBP12.26□□□□□ -0.45
VEGFA-216ENST00000512683 C17orf62Q9BQA9 187 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 NLNQ9BYT8 704 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 ING2Q9H160 280 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 UGT1A7Q9HAW7 530 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 UGT1A10Q9HAW8 530 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 UGT1A8Q9HAW9 530 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 UBP1Q9NZI7 540 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 KLHL8Q9P2G9 620 aaPredicted RBP12.26□□□□□ -0.45
VEGFA-216ENST00000512683 SLC24A2Q9UI40 661 aa12.26□□□□□ -0.45
VEGFA-216ENST00000512683 DOPEY2Q9Y3R5 2298 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 AGAP14A8MT82 685 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 K7EM74 188 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 MEN1O00255 615 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 DPM1O60762 260 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 TIAF1O95411 115 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 IGHEP01854 428 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 HBQ1P09105 142 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 GSTM1P09488 218 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 EBLN1P0CF75 366 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 CYLC1P35663 651 aaPredicted RBP12.25□□□□□ -0.45
VEGFA-216ENST00000512683 GSTM4Q03013 218 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 NFE2L1Q14494 772 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 KRT33BQ14525 404 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 NOMO1Q15155 1222 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 C4orf17Q53FE4 359 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 CAPRIN2Q6IMN6 1127 aaKnown RBP12.25□□□□□ -0.45
VEGFA-216ENST00000512683 ZNF449Q6P9G9 518 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 FAM151BQ6UXP7 276 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 BBS12Q6ZW61 710 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 DAAM2Q86T65 1068 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 GAS2L3Q86XJ1 694 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 TMEM126BQ8IUX1 230 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 CPT1CQ8TCG5 803 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 BLOC1S5Q8TDH9 187 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 MR1Q95460 341 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 ULK4Q96C45 1275 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 HAUS1Q96CS2 278 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 OXNAD1Q96HP4 312 aaPredicted RBP12.25□□□□□ -0.45
VEGFA-216ENST00000512683 CALR3Q96L12 384 aaKnown RBP12.25□□□□□ -0.45
VEGFA-216ENST00000512683 QKIQ96PU8 341 aaKnown RBP eCLIP12.25□□□□□ -0.45
VEGFA-216ENST00000512683 DHRS4Q9BTZ2 278 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 HEMGNQ9BXL5 484 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 FSD1LQ9BXM9 530 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 IMP3Q9NV31 184 aaKnown RBP12.25□□□□□ -0.45
VEGFA-216ENST00000512683 FEZ2Q9UHY8 353 aaPredicted RBP12.25□□□□□ -0.45
VEGFA-216ENST00000512683 SERTAD3Q9UJW9 196 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 EFR3BQ9Y2G0 817 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 AAR2Q9Y312 384 aaKnown RBP12.25□□□□□ -0.45
VEGFA-216ENST00000512683 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.25□□□□□ -0.45
VEGFA-216ENST00000512683 MAP4K5Q9Y4K4 846 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 PCDHA3Q9Y5H8 950 aa12.25□□□□□ -0.45
VEGFA-216ENST00000512683 USP9XQ93008 2570 aaPredicted RBP12.25□□□□□ -0.45
VEGFA-216ENST00000512683 BLACEA4D250 179 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 OR6C74A6NCV1 312 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms