RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 PPTC7Q8NI37 304 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 MR1Q95460 341 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 SLC35C1Q96A29 364 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 KLHL32Q96NJ5 620 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 WDR18Q9BV38 432 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 INSL6Q9Y581 213 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 DNMT3AQ9Y6K1 912 aaPredicted RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 KLRG2A4D1S0 409 aaPredicted RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 NPEPPSL1A6NEC2 478 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 C5orf60A6NFR6 353 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 ANXA2P2A6NMY6 339 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 FAM227AF5H4B4 570 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 PDCD5O14737 125 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 MSI1O43347 362 aaKnown RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 SEC24AO95486 1093 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 ANXA2P07355 339 aaKnown RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 CDK9P50750 372 aaKnown RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 LSM3P62310 102 aaKnown RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 KCNJ2P63252 427 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 ADAM8P78325 824 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 PLP2Q04941 152 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 ST3GAL4Q11206 333 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 HSPB3Q12988 150 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 CRHR2Q13324 411 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 MRPL49Q13405 166 aaKnown RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 HEPACAMQ14CZ8 416 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 NRF1Q16656 503 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 SPDYCQ5MJ68 293 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 PGM2L1Q6PCE3 622 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 POTEHQ6S545 545 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 KDM7AQ6ZMT4 941 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 LRRC70Q7Z2Q7 622 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 PIWIL4Q7Z3Z4 852 aaKnown RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 ECHDC2Q86YB7 292 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 DEFB119Q8N690 84 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 TRPV1Q8NER1 839 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 PNPT1Q8TCS8 783 aaKnown RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 TRPM4Q8TD43 1214 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 DNAJA4Q8WW22 397 aaPredicted RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 NINJ1Q92982 152 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 SLC47A1Q96FL8 570 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 ZFRQ96KR1 1074 aaKnown RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 GAL3ST1Q99999 423 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 BTBD10Q9BSF8 475 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 NXF3Q9H4D5 531 aaKnown RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 ANKZF1Q9H8Y5 726 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 AGO3Q9H9G7 860 aaKnown RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 SEC61A2Q9H9S3 476 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 MRM3Q9HC36 420 aaKnown RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 IL1RAPQ9NPH3 570 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 CENPMQ9NSP4 180 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 RDH8Q9NYR8 311 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 ERVK-18Q9QC07 812 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 SERTAD3Q9UJW9 196 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 VWA7Q9Y334 891 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 SPIN1Q9Y657 262 aaPredicted RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 WTIPA6NIX2 430 aaPredicted RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 RLN2P04090 185 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 ANXA4P09525 319 aaPredicted RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 PKMP14618 531 aaKnown RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 IDO1P14902 403 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 ZNF8P17098 575 aaPredicted RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 S100A1P23297 94 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 DCKP27707 260 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 KIR3DL1P43629 444 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 PTENP60484 403 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 CACNG1Q06432 222 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 NFATC2Q13469 925 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 ARFRP1Q13795 201 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 RFWD3Q6PCD5 774 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 CERS6Q6ZMG9 384 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 TMPPEQ6ZT21 453 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 ABHD13Q7L211 337 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 AMZ2Q86W34 360 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 ZNF280BQ86YH2 543 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 TMEM126BQ8IUX1 230 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 MTMR14Q8NCE2 650 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 SLC22A8Q8TCC7 542 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 KXD1Q9BQD3 176 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 WDR26Q9H7D7 661 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 TMBIM4Q9HC24 238 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 SPAG4Q9NPE6 437 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 GGA2Q9UJY4 613 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 FBXO9Q9UK97 447 aaPredicted RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 CFL2Q9Y281 166 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 PCDHGB1Q9Y5G3 927 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 CAPN6Q9Y6Q1 641 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 SYN3O14994 580 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 TSPAN1O60635 241 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 STK16O75716 305 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 RPP40O75818 363 aaKnown RBP5.71□□□□□ -1.5
USP38-203ENST00000511739 METTL18O95568 372 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 DHFRP00374 187 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 UROSP10746 265 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 IL12AP29459 219 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 PLA2G16P53816 162 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 RTP1P59025 263 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 DENND5AQ6IQ26 1287 aa5.71□□□□□ -1.5
USP38-203ENST00000511739 TNFAIP8L1Q8WVP5 186 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms