RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ZNF284Q2VY69 593 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 TXNDC8Q6A555 127 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 C15orf39Q6ZRI6 1047 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 Q6ZSV7 163 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 TPRG1Q6ZUI0 275 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 ZNF367Q7RTV3 350 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 TBC1D1Q86TI0 1168 aaPredicted RBP3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 GPAT4Q86UL3 456 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 TICAM1Q8IUC6 712 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 DENND6AQ8IWF6 608 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 DIS3L2Q8IYB7 885 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 PELI3Q8N2H9 469 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 PI4KAP1Q8N8J0 262 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 METTL6Q8TCB7 284 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 MRPS27Q92552 414 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 SNAPC3Q92966 411 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 KLHL29Q96CT2 875 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 SAAL1Q96ER3 474 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 MED8Q96G25 268 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 GFM1Q96RP9 751 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 ZPBPQ9BS86 351 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 MSTO1Q9BUK6 570 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 PUS3Q9BZE2 481 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 CATSPERBQ9H7T0 1116 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 MRPL44Q9H9J2 332 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 PCDHB16Q9NRJ7 776 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 OLA1Q9NTK5 396 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 ANKRD10Q9NXR5 420 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 NCKIPSDQ9NZQ3 722 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 AASSQ9UDR5 926 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 NDRG3Q9UGV2 375 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 PROCRQ9UNN8 238 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 NF1P21359 2839 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 IL16Q14005 1332 aa3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 TLN1Q9Y490 2541 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-208ENST00000511439 URB1O60287 2271 aaKnown RBP3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 SETD2Q9BYW2 2564 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 A0A0U1RQF3 1178 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 A0A1W2PRG0 241 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 NPIPB15A6NHN6 443 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 HSPB2A8KAH6 182 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 ANHXE9PGG2 379 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 MS4A18H0YCH9 400 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 CHL1O00533 1208 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 CDX4O14627 284 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 LDLRAD4O15165 306 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 TGFB1I1O43294 461 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 N4BP1O75113 896 aaKnown RBP3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 AKAP3O75969 853 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 SOX30O94993 753 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 PAPSS2O95340 614 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 STAG3L1P0CL83 205 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 PCNAP12004 261 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 CAPN3P20807 821 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 CA8P35219 290 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 CPOXP36551 454 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 HARS2P49590 506 aaKnown RBP3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 ENTPD1P49961 510 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 ADORA2A-AS1P86434 159 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 CNTN2Q02246 1040 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 CREB5Q02930 508 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 MECOMQ03112 1051 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 RUNX2Q13950 521 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 VEPH1Q14D04 833 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 HSPB2Q16082 182 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 OTUD1Q5VV17 481 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 HIST2H2BCQ6DN03 193 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 Q6ZTK2 550 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 TMTC3Q6ZXV5 915 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 TRILQ7L0X0 811 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 ATG9AQ7Z3C6 839 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 PATL1Q86TB9 770 aaKnown RBP3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 KBTBD6Q86V97 674 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 TICAM2Q86XR7 235 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 GPT2Q8TD30 523 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 UCMAQ8WVF2 138 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 MOCOSQ96EN8 888 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 APOLD1Q96LR9 279 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 CAMK1GQ96NX5 476 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 MEIS3Q99687 375 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 RBM38Q9H0Z9 239 aaKnown RBP3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 VCPKMTQ9H867 229 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 BRF2Q9HAW0 419 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 ORC3Q9UBD5 711 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 RIPK3Q9Y572 518 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 SRPRBQ9Y5M8 271 aaKnown RBP3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 CLUHO75153 1309 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 NRCAMQ92823 1304 aa3.61□□□□□ -1.83
TOPBP1-208ENST00000511439 PARP14Q460N5 1801 aa3.6□□□□□ -1.83
TOPBP1-208ENST00000511439 KIAA1217Q5T5P2 1943 aa3.6□□□□□ -1.83
TOPBP1-208ENST00000511439 SPG11Q96JI7 2443 aa3.6□□□□□ -1.83
TOPBP1-208ENST00000511439 CKAP5Q14008 2032 aa3.6□□□□□ -1.83
TOPBP1-208ENST00000511439 LRRK2Q5S007 2527 aa3.6□□□□□ -1.83
TOPBP1-208ENST00000511439 TYW5A2RUC4 315 aaKnown RBP3.6□□□□□ -1.83
TOPBP1-208ENST00000511439 CLEC18AA5D8T8 446 aa3.6□□□□□ -1.83
TOPBP1-208ENST00000511439 NPIPB11E5RHQ5 1161 aa3.6□□□□□ -1.83
TOPBP1-208ENST00000511439 GTPBP1O00178 669 aaKnown RBP3.6□□□□□ -1.83
TOPBP1-208ENST00000511439 ATP2A1O14983 1001 aa3.6□□□□□ -1.83
TOPBP1-208ENST00000511439 RGS14O43566 566 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms