RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 MAFKO60675 156 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 WISP3O95389 354 aaPredicted RBP12.68□□□□□ -0.38
HMGB2-205ENST00000511316 IGLV3-25P01717 112 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 MBL2P11226 248 aaPredicted RBP12.68□□□□□ -0.38
HMGB2-205ENST00000511316 PCSK2P16519 638 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 ATP5C1P36542 298 aaKnown RBP12.68□□□□□ -0.38
HMGB2-205ENST00000511316 RPS9P46781 194 aaKnown RBP12.68□□□□□ -0.38
HMGB2-205ENST00000511316 SUOXP51687 545 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 C21orf59P57076 290 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 KCNK10P57789 538 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 TOP3AQ13472 1001 aaPredicted RBP12.68□□□□□ -0.38
HMGB2-205ENST00000511316 SMAD1Q15797 465 aaKnown RBP12.68□□□□□ -0.38
HMGB2-205ENST00000511316 FXNQ16595 210 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 RBM48Q5RL73 367 aaKnown RBP12.68□□□□□ -0.38
HMGB2-205ENST00000511316 FAM182AQ5T1J6 154 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 AFMIDQ63HM1 303 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 KANK2Q63ZY3 851 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 MRNIPQ6NTE8 343 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 ZNF773Q6PK81 442 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 CYP2R1Q6VVX0 501 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 TPRG1Q6ZUI0 275 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 HTR3DQ70Z44 454 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 GALNT13Q8IUC8 556 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 PJA1Q8NG27 643 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 TRUB1Q8WWH5 349 aaKnown RBP12.68□□□□□ -0.38
HMGB2-205ENST00000511316 LRRC58Q96CX6 371 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 OLFM1Q99784 485 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 LTB4R2Q9NPC1 389 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 TMPRSS4Q9NRS4 437 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 ABCC13Q9NSE7 274 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 RBM22Q9NW64 420 aaKnown RBP eCLIP12.68□□□□□ -0.382e-6■■■■■ 31.4
HMGB2-205ENST00000511316 CFAP97Q9P2B7 532 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 LEF1Q9UJU2 399 aaPredicted RBP12.68□□□□□ -0.38
HMGB2-205ENST00000511316 VPS9D1Q9Y2B5 631 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 PIAS3Q9Y6X2 628 aa12.68□□□□□ -0.38
HMGB2-205ENST00000511316 CCDC78A2IDD5 438 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 SAC3D1A6NKF1 404 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 DEAF1O75398 565 aaPredicted RBP12.67□□□□□ -0.38
HMGB2-205ENST00000511316 ALBP02768 609 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 DCNP07585 359 aaKnown RBP12.67□□□□□ -0.38
HMGB2-205ENST00000511316 OGNP20774 298 aaKnown RBP12.67□□□□□ -0.38
HMGB2-205ENST00000511316 ATP6V1B2P21281 511 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 HTR1EP28566 365 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 CTHP32929 405 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 ATXN3P54252 364 aaPredicted RBP12.67□□□□□ -0.38
HMGB2-205ENST00000511316 PRAMEP78395 509 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 PHEXP78562 749 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 MESP2Q0VG99 397 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 EIF4EBP2Q13542 120 aaPredicted RBP12.67□□□□□ -0.38
HMGB2-205ENST00000511316 SEPT6Q14141 434 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 GAS6Q14393 721 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 MANEALQ5VSG8 457 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 BROXQ5VW32 411 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 BLOC1S3Q6QNY0 202 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 Q6ZNB5 142 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 USP51Q70EK9 711 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 ARHGAP12Q8IWW6 846 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 TP53INP2Q8IXH6 220 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 SLC15A3Q8IY34 581 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 ADGRG5Q8IZF4 528 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 RTL3Q8N8U3 475 aaKnown RBP12.67□□□□□ -0.38
HMGB2-205ENST00000511316 C1orf74Q96LT6 269 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 RPF2Q9H7B2 306 aaKnown RBP12.67□□□□□ -0.38
HMGB2-205ENST00000511316 RIC8BQ9NVN3 520 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 THG1LQ9NWX6 298 aaKnown RBP12.67□□□□□ -0.38
HMGB2-205ENST00000511316 UBP1Q9NZI7 540 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 SUN2Q9UH99 717 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 HELZP42694 1942 aaKnown RBP12.67□□□□□ -0.38
HMGB2-205ENST00000511316 MYOFQ9NZM1 2061 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 ANTXRLA6NF34 631 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 FAM170BA6NMN3 283 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 H3BMQ9 156 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 NR5A2O00482 541 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 NME4O00746 187 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 ARPC2O15144 300 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 PFDN6O15212 129 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 IRAK2O43187 625 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 GMNNO75496 209 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 EEDO75530 441 aaKnown RBP12.67□□□□□ -0.38
HMGB2-205ENST00000511316 STC2O76061 302 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 MLYCDO95822 493 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 CHRNB1P11230 501 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 CKMT2P17540 419 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 CCNA2P20248 432 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 GJA4P35212 333 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 WNT3AP56704 352 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 GABARAPL2P60520 117 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 LCP2Q13094 533 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 CRY1Q16526 586 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 ITPRIPL2Q3MIP1 535 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 UGT3A2Q3SY77 523 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 TTC23Q5W5X9 447 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 GRAMD4Q6IC98 578 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 ZNF852Q6ZMS4 543 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 TAC4Q86UU9 113 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 FUNDC1Q8IVP5 155 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 BBS7Q8IWZ6 715 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 DDIASQ8IXT1 998 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 YAF2Q8IY57 180 aa12.67□□□□□ -0.38
HMGB2-205ENST00000511316 TTC30BQ8N4P2 665 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms