RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 UBXN7O94888 489 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 JMJD7P0C870 316 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 THRAP10827 490 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 CCL4P13236 92 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 PDHA2P29803 388 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 CSE1LP55060 971 aaKnown RBP13.66□□□□□ -0.22
DDX41-212ENST00000511040 GFERP55789 205 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 ETF1P62495 437 aaKnown RBP13.66□□□□□ -0.22
DDX41-212ENST00000511040 MRPS25P82663 173 aaKnown RBP13.66□□□□□ -0.22
DDX41-212ENST00000511040 DR1Q01658 176 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 IZUMO3Q5VZ72 239 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 CAPRIN2Q6IMN6 1127 aaKnown RBP13.66□□□□□ -0.22
DDX41-212ENST00000511040 CERS6Q6ZMG9 384 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 LSMEM2Q8N112 164 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 LKAAEAR1Q8TD35 194 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 ELMO1Q92556 727 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 RSC1A1Q92681 617 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 FGF11Q92914 225 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 SLCO2A1Q92959 643 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 ZNF669Q96BR6 464 aaPredicted RBP13.66□□□□□ -0.22
DDX41-212ENST00000511040 FCRL3Q96P31 734 aaPredicted RBP13.66□□□□□ -0.22
DDX41-212ENST00000511040 TGM7Q96PF1 710 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 CMKLR1Q99788 373 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 ANAPC5Q9UJX4 755 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 MAD1L1Q9Y6D9 718 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 PIKFYVEQ9Y2I7 2098 aa13.66□□□□□ -0.22
DDX41-212ENST00000511040 DMXL2Q8TDJ6 3036 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 C17orf113A0A1B0GUU1 675 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 KLHL33A6NCF5 533 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 IQCF5A8MTL0 148 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 DNALI1O14645 258 aaPredicted RBP13.65□□□□□ -0.22
DDX41-212ENST00000511040 TTI1O43156 1089 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 BANF1O75531 89 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 DXOO77932 396 aaKnown RBP13.65□□□□□ -0.22
DDX41-212ENST00000511040 F7P08709 466 aaPredicted RBP13.65□□□□□ -0.22
DDX41-212ENST00000511040 OR56A5P0C7T3 313 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 MLNP12872 115 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 LEPRP48357 1165 aaKnown RBP13.65□□□□□ -0.22
DDX41-212ENST00000511040 MAPK10P53779 464 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 PPP1CAP62136 330 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 EIF3IQ13347 325 aaKnown RBP13.65□□□□□ -0.22
DDX41-212ENST00000511040 BOP1Q14137 746 aaKnown RBP13.65□□□□□ -0.22
DDX41-212ENST00000511040 KRT33BQ14525 404 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 PLCL1Q15111 1095 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 AARS2Q5JTZ9 985 aaKnown RBP13.65□□□□□ -0.22
DDX41-212ENST00000511040 WDR74Q6RFH5 385 aaPredicted RBP13.65□□□□□ -0.22
DDX41-212ENST00000511040 C19orf48Q6RUI8 117 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 KRT222Q8N1A0 295 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 PHC3Q8NDX5 983 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 SGSM3Q96HU1 749 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 ZNF578Q96N58 590 aaPredicted RBP13.65□□□□□ -0.22
DDX41-212ENST00000511040 KRT12Q99456 494 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 DPYSL5Q9BPU6 564 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 TRIM31Q9BZY9 425 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 OR52A5Q9H2C5 316 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 THSD1Q9NS62 852 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 AKAP7Q9P0M2 348 aaPredicted RBP13.65□□□□□ -0.22
DDX41-212ENST00000511040 USP24Q9UPU5 2620 aa13.65□□□□□ -0.22
DDX41-212ENST00000511040 CAPN5O15484 640 aaPredicted RBP13.64□□□□□ -0.23
DDX41-212ENST00000511040 NDUFS3O75489 264 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 KRT37O76014 449 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 FTH1P02794 183 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 ITGA2BP08514 1039 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 IVDP26440 423 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 PPARGP37231 505 aaPredicted RBP13.64□□□□□ -0.23
DDX41-212ENST00000511040 MAGEA3P43357 314 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 ARCN1P48444 511 aaKnown RBP13.64□□□□□ -0.23
DDX41-212ENST00000511040 TTPAP49638 278 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 C2orf54Q08AI8 447 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 DHX34Q14147 1143 aaKnown RBP13.64□□□□□ -0.23
DDX41-212ENST00000511040 ANKRD20A4Q4UJ75 823 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 SYTL3Q4VX76 610 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 PTRHD1Q6GMV3 140 aaKnown RBP13.64□□□□□ -0.23
DDX41-212ENST00000511040 KIAA0930Q6ICG6 404 aaPredicted RBP13.64□□□□□ -0.23
DDX41-212ENST00000511040 IRGCQ6NXR0 463 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 ZNF449Q6P9G9 518 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 FAM129CQ86XR2 697 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 RBM12BQ8IXT5 1001 aaKnown RBP13.64□□□□□ -0.23
DDX41-212ENST00000511040 SNIP1Q8TAD8 396 aaKnown RBP13.64□□□□□ -0.23
DDX41-212ENST00000511040 HNRNPLLQ8WVV9 542 aaKnown RBP13.64□□□□□ -0.23
DDX41-212ENST00000511040 USP7Q93009 1102 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 PMEPA1Q969W9 287 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 PWWP2AQ96N64 755 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 RUNDC3BQ96NL0 473 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 FERD3LQ96RJ6 166 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 NRTNQ99748 197 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 EPB41L1Q9H4G0 881 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 OCIAD1Q9NX40 245 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 PDP2Q9P2J9 529 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 RNF14Q9UBS8 474 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 SLC24A2Q9UI40 661 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 RPS6KL1Q9Y6S9 549 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 ACACAQ13085 2346 aa13.64□□□□□ -0.23
DDX41-212ENST00000511040 URB1O60287 2271 aaKnown RBP13.64□□□□□ -0.23
DDX41-212ENST00000511040 WDFY3Q8IZQ1 3526 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 EPG5Q9HCE0 2579 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 FAM237BA0A1B0GVD1 139 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 UBA6A0AVT1 1052 aaPredicted RBP13.63□□□□□ -0.23
DDX41-212ENST00000511040 EFCAB7A8K855 629 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 CDRT15L2A8MXV6 281 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms