RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 CFAP47Q6ZTR5 3102 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 VRK3Q8IV63 474 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 IGDCC3Q8IVU1 814 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 TRIM48Q8IWZ4 208 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 LMNTD1Q8N9Z9 388 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 HM13Q8TCT9 377 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 PPM1MQ96MI6 270 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 WDR83Q9BRX9 315 aaKnown RBP13.26□□□□□ -0.29
SNF8-206ENST00000509989 IL22Q9GZX6 179 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 PLAC1Q9HBJ0 212 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 FOXJ2Q9P0K8 574 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 GALPQ9UBC7 116 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 PCYOX1Q9UHG3 505 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 LILRA5A6NI73 299 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 C9orf172C9J069 976 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 DNALI1O14645 258 aaPredicted RBP13.25□□□□□ -0.29
SNF8-206ENST00000509989 DXOO77932 396 aaKnown RBP13.25□□□□□ -0.29
SNF8-206ENST00000509989 GAS8O95995 478 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 TPBGLP0DKB5 382 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 VCLP18206 1134 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 PRAMEP78395 509 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 C2orf54Q08AI8 447 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 ITIH4Q14624 930 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 TGIF1Q15583 401 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 FASTKD1Q53R41 847 aaKnown RBP13.25□□□□□ -0.29
SNF8-206ENST00000509989 CTSL3PQ5NE16 218 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 HP1BP3Q5SSJ5 553 aaPredicted RBP13.25□□□□□ -0.29
SNF8-206ENST00000509989 IZUMO3Q5VZ72 239 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 TMEM71Q6P5X7 295 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 PACS1Q6VY07 963 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 CERS6Q6ZMG9 384 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 ARHGAP22Q7Z5H3 698 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 JAMLQ86YT9 394 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 MCUQ8NE86 351 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 OR4D9Q8NGE8 314 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 OR10G6Q8NH81 332 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 USP7Q93009 1102 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 AHCYL2Q96HN2 611 aaKnown RBP13.25□□□□□ -0.29
SNF8-206ENST00000509989 ZNF514Q96K75 400 aaPredicted RBP13.25□□□□□ -0.29
SNF8-206ENST00000509989 TMEM74Q96NL1 305 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 CATSPERZQ9NTU4 200 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 PDP2Q9P2J9 529 aa13.25□□□□□ -0.29
SNF8-206ENST00000509989 GOLGA6L10A0A0M3HER8 536 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 ZCWPW2A0A1B0GU75 182 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 KRT87PA6NCN2 255 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 BHMG1C9JSJ3 638 aaPredicted RBP13.24□□□□□ -0.29
SNF8-206ENST00000509989 CFAP99D6REC4 459 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 DUX1O43812 170 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 PRAMEF10O60809 474 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 KCNJ13O60928 360 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 UBXN7O94888 489 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 RALBP11234 206 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 SLC2A4P14672 509 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 SLC5A2P31639 672 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 CCR7P32248 378 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 HALP42357 657 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 NSG1P42857 185 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 ETF1P62495 437 aaKnown RBP13.24□□□□□ -0.29
SNF8-206ENST00000509989 GPLD1P80108 840 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 CDK16Q00536 496 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 BOP1Q14137 746 aaKnown RBP13.24□□□□□ -0.29
SNF8-206ENST00000509989 ANKRD20A4Q4UJ75 823 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 CASC4Q6P4E1 433 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 FAM92BQ6ZTR7 304 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 CENPUQ71F23 418 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 NLRP9Q7RTR0 991 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 PPIL6Q8IXY8 311 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 BMPERQ8N8U9 685 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 GRK7Q8WTQ7 553 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 ELMO1Q92556 727 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 FGF11Q92914 225 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 SLCO2A1Q92959 643 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 ZNF669Q96BR6 464 aaPredicted RBP13.24□□□□□ -0.29
SNF8-206ENST00000509989 FAM136AQ96C01 138 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 TGM7Q96PF1 710 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 KRT12Q99456 494 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 CTRCQ99895 268 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 TRIM31Q9BZY9 425 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 P2RY12Q9H244 342 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 MRM3Q9HC36 420 aaKnown RBP13.24□□□□□ -0.29
SNF8-206ENST00000509989 APMAPQ9HDC9 416 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 POT1Q9NUX5 634 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 ASIC3Q9UHC3 531 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 CIDEBQ9UHD4 219 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 CDYLQ9Y232 598 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 PCDHGA8Q9Y5G5 932 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 ZFYVE26Q68DK2 2539 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 ANKRD12Q6UB98 2062 aa13.24□□□□□ -0.29
SNF8-206ENST00000509989 CHD6Q8TD26 2715 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 MN1Q10571 1320 aaPredicted RBP13.23□□□□□ -0.29
SNF8-206ENST00000509989 C17orf113A0A1B0GUU1 675 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 SLC5A10A0PJK1 596 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 CAPN5O15484 640 aaPredicted RBP13.23□□□□□ -0.29
SNF8-206ENST00000509989 AP2A2O94973 939 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 C9P02748 559 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 SLC35G4P0C7Q5 338 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 AMD1P17707 334 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 SEPHS1P49903 392 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 EPHA4P54764 986 aa13.23□□□□□ -0.29
SNF8-206ENST00000509989 SH3BP2P78314 561 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms