RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 FAM153AQ9UHL3 310 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 TFR2Q9UP52 801 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 FARSAQ9Y285 508 aaKnown RBP13.03□□□□□ -0.32
DDX41-210ENST00000509576 GLYATL1P3A0A0U1RQE8 302 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 OR6C74A6NCV1 312 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 TTLL8A6PVC2 850 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 TCP11X1B4DZS4 312 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 PPP1R12AO14974 1030 aaPredicted RBP13.02□□□□□ -0.33
DDX41-210ENST00000509576 SCRG1O75711 98 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 AGTP01019 485 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 MT-ND3P03897 115 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 PRSS56P0CW18 603 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 TNNT1P13805 278 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 COMTP21964 271 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 LPOP22079 712 aaPredicted RBP13.02□□□□□ -0.33
DDX41-210ENST00000509576 TUBB4BP68371 445 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 HSD11B2P80365 405 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 ACY1Q03154 408 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 TUBB2AQ13885 445 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 LRRC38Q5VT99 294 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 IZUMO3Q5VZ72 239 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 ZC3H18Q86VM9 953 aaKnown RBP13.02□□□□□ -0.33
DDX41-210ENST00000509576 ATCAYQ86WG3 371 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 DSELQ8IZU8 1212 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 ZBTB2Q8N680 514 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 ENDOVQ8N8Q3 282 aaKnown RBP13.02□□□□□ -0.33
DDX41-210ENST00000509576 IPMKQ8NFU5 416 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.02□□□□□ -0.33
DDX41-210ENST00000509576 MR1Q95460 341 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 C19orf60Q96EN9 201 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 TCTN2Q96GX1 697 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 C12orf66Q96MD2 445 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 FCRL5Q96RD9 977 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 SLC25A23Q9BV35 468 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 TUBB2BQ9BVA1 445 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 GPR87Q9BY21 358 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 KIR3DX1Q9H7L2 352 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 LRRC4CQ9HCJ2 640 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 PCMTD2Q9NV79 361 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 POMT2Q9UKY4 750 aa13.02□□□□□ -0.33
DDX41-210ENST00000509576 DIDO1Q9BTC0 2240 aaKnown RBP13.01□□□□□ -0.33
DDX41-210ENST00000509576 POLEQ07864 2286 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 SSU72P8A0A1W2PR75 194 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 A1L4Q6 167 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 MGAT4DA6NG13 374 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 SLC9B1P1A6NJY1 282 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 AGAP14A8MT82 685 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 H3BMH7 237 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 BTN3A3O00478 584 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 CCL22O00626 93 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 KRT86O43790 486 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 CST8O60676 142 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 CPNE3O75131 537 aaKnown RBP13.01□□□□□ -0.33
DDX41-210ENST00000509576 CNOT3O75175 753 aaKnown RBP13.01□□□□□ -0.33
DDX41-210ENST00000509576 EPOP01588 193 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 PVRP15151 417 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 ST6GAL1P15907 406 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 POLR2CP19387 275 aaPredicted RBP13.01□□□□□ -0.33
DDX41-210ENST00000509576 ADRA1AP35348 466 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 HALP42357 657 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 CDKN1CP49918 316 aaPredicted RBP13.01□□□□□ -0.33
DDX41-210ENST00000509576 PGDP52209 483 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 GTF2H3Q13889 308 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 PLCL1Q15111 1095 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 INPP5JQ15735 1006 aaPredicted RBP13.01□□□□□ -0.33
DDX41-210ENST00000509576 EIF2S3LQ2VIR3 472 aaKnown RBP13.01□□□□□ -0.33
DDX41-210ENST00000509576 PTCHD3Q3KNS1 767 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 LDLRAP1Q5SW96 308 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 KAZNQ674X7 775 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 SLC6A19Q695T7 634 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 JMJD6Q6NYC1 403 aaPredicted RBP13.01□□□□□ -0.33
DDX41-210ENST00000509576 SPOCD1Q6ZMY3 1216 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 GLT6D1Q7Z4J2 308 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 KMT5CQ86Y97 462 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 TMEM126BQ8IUX1 230 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 OR13C4Q8NGS5 318 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 BRSK1Q8TDC3 778 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 TFB1MQ8WVM0 346 aaKnown RBP13.01□□□□□ -0.33
DDX41-210ENST00000509576 THAP4Q8WY91 577 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 CD180Q99467 661 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 APOL2Q9BQE5 337 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 MFRPQ9BY79 579 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 KLHL25Q9H0H3 589 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 TRABDQ9H4I3 376 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 KCND1Q9NSA2 647 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 FKBPLQ9UIM3 349 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 TCFL5Q9UL49 500 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 DNMT3AQ9Y6K1 912 aaPredicted RBP13.01□□□□□ -0.33
DDX41-210ENST00000509576 ZGRF1Q86YA3 2104 aa13.01□□□□□ -0.33
DDX41-210ENST00000509576 CREBBPQ92793 2442 aa13□□□□□ -0.33
DDX41-210ENST00000509576 hCG_1818297A0A087WSY0 165 aa13□□□□□ -0.33
DDX41-210ENST00000509576 GOLGA6L22H0YM25 854 aa13□□□□□ -0.33
DDX41-210ENST00000509576 MEN1O00255 615 aa13□□□□□ -0.33
DDX41-210ENST00000509576 KCNJ13O60928 360 aa13□□□□□ -0.33
DDX41-210ENST00000509576 AGFG2O95081 481 aa13□□□□□ -0.33
DDX41-210ENST00000509576 PRAMEF1O95521 474 aa13□□□□□ -0.33
DDX41-210ENST00000509576 ZBTB11O95625 1053 aaPredicted RBP13□□□□□ -0.33
DDX41-210ENST00000509576 CLDN1O95832 211 aa13□□□□□ -0.33
DDX41-210ENST00000509576 TPBGLP0DKB5 382 aa13□□□□□ -0.33
DDX41-210ENST00000509576 VCLP18206 1134 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms