RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 SARM1Q6SZW1 724 aa4.11□□□□□ -1.75
UBE2D3-225ENST00000508476 SCYL3Q8IZE3 742 aa4.11□□□□□ -1.75
UBE2D3-225ENST00000508476 ZNF383Q8NA42 475 aa4.11□□□□□ -1.75
UBE2D3-225ENST00000508476 OPRPNQ99935 248 aaPredicted RBP4.11□□□□□ -1.75
UBE2D3-225ENST00000508476 RTP3Q9BQQ7 232 aa4.11□□□□□ -1.75
UBE2D3-225ENST00000508476 TUBB2BQ9BVA1 445 aa4.11□□□□□ -1.75
UBE2D3-225ENST00000508476 SH2D4AQ9H788 454 aa4.11□□□□□ -1.75
UBE2D3-225ENST00000508476 KAT14Q9H8E8 782 aa4.11□□□□□ -1.75
UBE2D3-225ENST00000508476 SMC4Q9NTJ3 1288 aa4.11□□□□□ -1.75
UBE2D3-225ENST00000508476 OGFRQ9NZT2 677 aa4.11□□□□□ -1.75
UBE2D3-225ENST00000508476 FBXL17Q9UF56 701 aa4.11□□□□□ -1.75
UBE2D3-225ENST00000508476 PNMA2Q9UL42 364 aa4.11□□□□□ -1.75
UBE2D3-225ENST00000508476 MEIOCA2RUB1 952 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 DNM1LO00429 736 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 SH2B2O14492 632 aaPredicted RBP4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 GH2P01242 217 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 GAGE2BQ13066 116 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 GAGE2EQ4V326 116 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 GAGE2AQ6NT46 116 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 CORO6Q6QEF8 472 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 GPALPP1Q8IXQ4 340 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 OR2T6Q8NHC8 308 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 TBC1D16Q8TBP0 767 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 POMGNT1Q8WZA1 660 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 ZNF689Q96CS4 500 aaPredicted RBP4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 POM121L2Q96KW2 1035 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 NCAPGQ9BPX3 1015 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 CDK19Q9BWU1 502 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 OLFML3Q9NRN5 406 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 OLA1Q9NTK5 396 aaKnown RBP4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 NPAP1Q9NZP6 1156 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 GAGE2DQ9UEU5 116 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 PCDHGA5Q9Y5G8 931 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 SPIN1Q9Y657 262 aaPredicted RBP4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 SESN1Q9Y6P5 492 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 RNF215Q9Y6U7 377 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 RUSC2Q8N2Y8 1516 aa4.1□□□□□ -1.75
UBE2D3-225ENST00000508476 IGLV9-49A0A0B4J1Y8 123 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 PRSS51A0A1B0GVH4 220 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 PLEKHD1A6NEE1 506 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 TCERG1O14776 1098 aaKnown RBP4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 EML2O95834 649 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 H1F0P07305 194 aaKnown RBP4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 HMBSP08397 361 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 PON1P27169 355 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 MAN1A1P33908 653 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 P2RY6Q15077 328 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 GCNT6Q5T4J0 391 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 ADALQ6DHV7 355 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 PWWP2BQ6NUJ5 590 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 SLC16A9Q7RTY1 509 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 SCML4Q8N228 414 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 USP6NLQ92738 828 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 GMPPAQ96IJ6 420 aaPredicted RBP4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 LINC00479Q96M42 142 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 ABHD6Q9BV23 337 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 FTOQ9C0B1 505 aaKnown RBP eCLIP4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 ATAD3AQ9NVI7 634 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 BARHL2Q9NY43 387 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 PAK5Q9P286 719 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 SLC7A7Q9UM01 511 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 NENFQ9UMX5 172 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 PRSS21Q9Y6M0 314 aa4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 TDRD9Q8NDG6 1382 aaKnown RBP4.09□□□□□ -1.75
UBE2D3-225ENST00000508476 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 MYO1GB0I1T2 1018 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 NDUFS4O43181 175 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 ARHGEF9O43307 516 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 ABCC9O60706 1549 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 ZFAND5O76080 213 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 SORBS2O94875 1100 aaKnown RBP4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 MBD4O95243 580 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 CLTBP09497 229 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 CHMP24386 653 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 CDH8P55286 799 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 KRTAP10-3P60369 221 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 RPS18P62269 152 aaKnown RBP4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 PRAMEP78395 509 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 KCNJ10P78508 379 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 SETQ01105 290 aaPredicted RBP4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 LGALS3BPQ08380 585 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 DCAF10Q5QP82 559 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 CYP4A22Q5TCH4 519 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 FAM109BQ6ICB4 259 aaPredicted RBP4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 CHST9Q7L1S5 443 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 GTSCR1Q86UQ5 136 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 TICAM1Q8IUC6 712 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 ARID3BQ8IVW6 561 aaPredicted RBP4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 TEX11Q8IYF3 940 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 TMTC2Q8N394 836 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 KBTBD8Q8NFY9 601 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 EGFL8Q99944 293 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 TRAF4Q9BUZ4 470 aaPredicted RBP4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 UNC45AQ9H3U1 944 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 PLCXD1Q9NUJ7 323 aa4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 KLHL8Q9P2G9 620 aaPredicted RBP4.08□□□□□ -1.76
UBE2D3-225ENST00000508476 SOS1Q07889 1333 aaPredicted RBP4.07□□□□□ -1.76
UBE2D3-225ENST00000508476 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.07□□□□□ -1.76
UBE2D3-225ENST00000508476 IGHV4-61A0A0C4DH41 118 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms