RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 FIBCD1Q8N539 461 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 RHBDF1Q96CC6 855 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 TCEAL4Q96EI5 215 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 SNX27Q96L92 541 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 MRPL45Q9BRJ2 306 aaKnown RBP7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 ERVK-6Q9BXR3 956 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 MRPL9Q9BYD2 267 aaKnown RBP7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 SMURF2Q9HAU4 748 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 ZFYVE1Q9HBF4 777 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 IL1RAPQ9NPH3 570 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 CNTN3Q9P232 1028 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 TIMM22Q9Y584 194 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 PTPRJQ12913 1337 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 DIP2AQ14689 1571 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 PIK3C2BO00750 1634 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 H3BM21 787 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 hCG_2039718K7EN88 272 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 XPNPEP2O43895 674 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 MFSD11O43934 449 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 MRPS14O60783 128 aaKnown RBP7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 RNASEH2AO75792 299 aaKnown RBP7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 GADD45GO95257 159 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 USP17L7P0C7H9 530 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 PTPN1P18031 435 aaKnown RBP7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 CDH5P33151 784 aaPredicted RBP7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 TSTQ16762 297 aaKnown RBP7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 EML3Q32P44 896 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 HSDL1Q3SXM5 330 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 XKR6Q5GH73 641 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 KIAA1614Q5VZ46 1190 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 KIAA0930Q6ICG6 404 aaPredicted RBP7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 DCP2Q8IU60 420 aaKnown RBP7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 INO80EQ8NBZ0 244 aaPredicted RBP7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 EXOC2Q96KP1 924 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 CGREF1Q99674 301 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 ACO2Q99798 780 aaKnown RBP7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 ZYG11BQ9C0D3 744 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 TFB2MQ9H5Q4 396 aaKnown RBP7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 ASB8Q9H765 288 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 SEMA3GQ9NS98 782 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 COL20A1Q9P218 1284 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 MAGED1Q9Y5V3 778 aaPredicted RBP7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 CEPT1Q9Y6K0 416 aa7.22□□□□□ -1.25
UBE2D3-224ENST00000508474 A0A1W2PP18 115 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 MAGEB17A8MXT2 336 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 SMIM22K7EJ46 135 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 GPR182O15218 404 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 KERAO60938 352 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 ZNF432O94892 652 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 LRATO95237 230 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 CLDN9O95484 217 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 CETPP11597 493 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 TNNI3P19429 210 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 MAPK9P45984 424 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 ALDH7A1P49419 539 aaKnown RBP7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 ZNF81P51508 661 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 S100A12P80511 92 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 PPP2R2BQ00005 443 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 RPL6Q02878 288 aaKnown RBP7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 PCLAFQ15004 111 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 GPAT3Q53EU6 434 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 ZNF697Q5TEC3 545 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 TMEM236Q5W0B7 351 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 FAM35AQ86V20 835 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 PIGZQ86VD9 579 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 ABHD11Q8NFV4 315 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 OR10G2Q8NGC3 310 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 STOML3Q8TAV4 291 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 TSSK3Q96PN8 268 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 COLEC11Q9BWP8 271 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 DUSP16Q9BY84 665 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 FOLH1BQ9HBA9 442 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 INTS7Q9NVH2 962 aaKnown RBP7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 MEMO1Q9Y316 297 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 SPIN1Q9Y657 262 aaPredicted RBP7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 RIC1Q4ADV7 1423 aa7.21□□□□□ -1.25
UBE2D3-224ENST00000508474 TEX51A0A1B0GUA7 166 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 TMEM150BA6NC51 233 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 AGRPO00253 132 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 DYNC1LI2O43237 492 aaPredicted RBP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 SLC28A2O43868 658 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 CDC40O60508 579 aaKnown RBP eCLIP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 RFPL1O75677 317 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 ZNF10P21506 573 aaPredicted RBP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 PBLDP30039 288 aaPredicted RBP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 MAP2K3P46734 347 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 OR1G1P47890 313 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 MTPNP58546 118 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 PPP3R1P63098 170 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 TXNL4AP83876 142 aaKnown RBP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 SMARCB1Q12824 385 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 CAMK1Q14012 370 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 DALRD3Q5D0E6 543 aaKnown RBP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 PIGGQ5H8A4 983 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 ZNF280DQ6N043 979 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 ARMC6Q6NXE6 501 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 RHBDF2Q6PJF5 856 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 ZNF567Q8N184 647 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 CLIP4Q8N3C7 705 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 KLHL36Q8N4N3 616 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms