RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 MCF2LO15068 1137 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 SLC31A1O15431 190 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 INSIG1O15503 277 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 RASA4O43374 803 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 KDELR3O43731 214 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 SH3BP5O60239 455 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 PRPSAP2O60256 369 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 TMEM127O75204 238 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 GJB3O75712 270 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 RNF8O76064 485 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 KCNK5O95279 499 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 ASMTLO95671 621 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 GPANK1O95872 356 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 TOP3BO95985 862 aaKnown RBP4.58□□□□□ -1.68
NUP54-206ENST00000508465 WNT1P04628 370 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 CD59P13987 128 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 PRLRP16471 622 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 C5AR1P21730 350 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 CD27P26842 260 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 IL1R2P27930 398 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 MASP1P48740 699 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 PAPOLAP51003 745 aaKnown RBP4.58□□□□□ -1.68
NUP54-206ENST00000508465 ATXN3P54252 364 aaPredicted RBP4.58□□□□□ -1.68
NUP54-206ENST00000508465 ADPRHP54922 357 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 GSCP56915 257 aaPredicted RBP4.58□□□□□ -1.68
NUP54-206ENST00000508465 TAS2R38P59533 333 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 TPI1P60174 286 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 ARF5P84085 180 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 IL9RQ01113 521 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 SEMG2Q02383 582 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 OCA2Q04671 838 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 ZBTB16Q05516 673 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 SLC20A2Q08357 652 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 GRIK2Q13002 908 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 MTA1Q13330 715 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 ELAVL3Q14576 367 aaKnown RBP4.58□□□□□ -1.68
NUP54-206ENST00000508465 CYTH1Q15438 398 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 KIF19Q2TAC6 998 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 SMTNL2Q2TAL5 461 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 HLA-BQ31612 363 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 MYLK3Q32MK0 819 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 TTC31Q49AM3 519 aaPredicted RBP4.58□□□□□ -1.68
NUP54-206ENST00000508465 CARD16Q5EG05 197 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 LRRC73Q5JTD7 316 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 ERMARDQ5T6L9 678 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 KIAA0895LQ68EN5 471 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 SPECC1LQ69YQ0 1117 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 RETSATQ6NUM9 610 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 ALKBH5Q6P6C2 394 aaKnown RBP4.58□□□□□ -1.68
NUP54-206ENST00000508465 ZNF783Q6ZMS7 281 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 CYP4V2Q6ZWL3 525 aaPredicted RBP4.58□□□□□ -1.68
NUP54-206ENST00000508465 DSG4Q86SJ6 1040 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 GAS2L3Q86XJ1 694 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 VSTM4Q8IW00 320 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 MINDY1Q8N5J2 469 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 RTL3Q8N8U3 475 aaKnown RBP4.58□□□□□ -1.68
NUP54-206ENST00000508465 DCAF4L2Q8NA75 395 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 OR8K1Q8NGG5 319 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 OR2T34Q8NGX1 318 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 SETD7Q8WTS6 366 aaKnown RBP4.58□□□□□ -1.68
NUP54-206ENST00000508465 NTAN1Q96AB6 310 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 SERAC1Q96JX3 654 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 MYOCQ99972 504 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 SNRNP25Q9BV90 132 aaKnown RBP4.58□□□□□ -1.68
NUP54-206ENST00000508465 NUP85Q9BW27 656 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 PACSIN1Q9BY11 444 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 TRIM5Q9C035 493 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 SLC39A8Q9C0K1 460 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 MAGEH1Q9H213 219 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 ZDHHC6Q9H6R6 413 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 GAREM1Q9H706 876 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 SGK2Q9HBY8 427 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 AASDHPPTQ9NRN7 309 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 SPTLC3Q9NUV7 552 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 ETNK2Q9NVF9 386 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 TMEM248Q9NWD8 314 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 CWC15Q9P013 229 aaKnown RBP4.58□□□□□ -1.68
NUP54-206ENST00000508465 IL36AQ9UHA7 158 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 KCNE5Q9UJ90 142 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 HPCAL4Q9UM19 191 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 HS3ST2Q9Y278 367 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 ANKRD6Q9Y2G4 727 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.58□□□□□ -1.68
NUP54-206ENST00000508465 BZW2Q9Y6E2 419 aaKnown RBP4.58□□□□□ -1.68
NUP54-206ENST00000508465 KNL1Q8NG31 2342 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 NUP205Q92621 2012 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 CEP192Q8TEP8 1941 aa4.58□□□□□ -1.68
NUP54-206ENST00000508465 DMXL2Q8TDJ6 3036 aa4.57□□□□□ -1.68
NUP54-206ENST00000508465 PI4KAP42356 2102 aa4.57□□□□□ -1.68
NUP54-206ENST00000508465 AKAP13Q12802 2813 aa4.57□□□□□ -1.68
NUP54-206ENST00000508465 IGLON5A6NGN9 336 aa4.57□□□□□ -1.68
NUP54-206ENST00000508465 C16orf96A6NNT2 1141 aa4.57□□□□□ -1.68
NUP54-206ENST00000508465 ZNF891A8MT65 544 aaPredicted RBP4.57□□□□□ -1.68
NUP54-206ENST00000508465 A8MX80 341 aa4.57□□□□□ -1.68
NUP54-206ENST00000508465 MYO1FO00160 1098 aa4.57□□□□□ -1.68
NUP54-206ENST00000508465 DFFAO00273 331 aa4.57□□□□□ -1.68
NUP54-206ENST00000508465 PEX1O43933 1283 aa4.57□□□□□ -1.68
NUP54-206ENST00000508465 AKR1B10O60218 316 aa4.57□□□□□ -1.68
NUP54-206ENST00000508465 LRCH4O75427 683 aa4.57□□□□□ -1.68
NUP54-206ENST00000508465 TMCC1O94876 653 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms