RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 IPO7O95373 1038 aaKnown RBP12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 PYGMP11217 842 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 FOLR1P15328 257 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 PRLHRP49683 370 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 TUBB3Q13509 450 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 DEFB109BQ30KR1 87 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 CYB5D1Q6P9G0 228 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 KLHL35Q6PF15 583 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 DARS2Q6PI48 645 aaKnown RBP12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 CERS6Q6ZMG9 384 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 PTRH1Q86Y79 214 aaKnown RBP12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 NXPE1Q8N323 547 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 LILRA3Q8N6C8 439 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 RMDN2Q96LZ7 410 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 C12orf66Q96MD2 445 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 TBL1YQ9BQ87 522 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 FERMT1Q9BQL6 677 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 KIR3DX1Q9H7L2 352 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 FAM8A1Q9UBU6 413 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 SLC24A2Q9UI40 661 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 CRLS1Q9UJA2 301 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 ACSL5Q9ULC5 683 aa12.7□□□□□ -0.38
HMGCS1-205ENST00000508319 LDB2O43679 373 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 TJP3O95049 919 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 CRTAMO95727 393 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 FURINP09958 794 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 SLC35G4P0C7Q5 338 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 EBLN1P0CF75 366 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 SPTBP11277 2137 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 ITGALP20701 1170 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 VAV2P52735 878 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 NAP1L1P55209 391 aaKnown RBP12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 PDE1BQ01064 536 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 TLE1Q04724 770 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 SPARCL1Q14515 664 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 PRPSAP1Q14558 356 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 DNTTIP2Q5QJE6 756 aaKnown RBP12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 KCTD11Q693B1 232 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 PWWP2BQ6NUJ5 590 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 C16orf46Q6P387 395 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 MICALCLQ6ZW33 695 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 KMT5CQ86Y97 462 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 SIDT2Q8NBJ9 832 aaKnown RBP12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 C9orf43Q8TAL5 461 aaPredicted RBP12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 APOBEC4Q8WW27 367 aaKnown RBP12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 ZFPM2Q8WW38 1151 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 PPP1R2P1Q96PQ5 205 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 CD180Q99467 661 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 C19orf43Q9BQ61 176 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 ARNT2Q9HBZ2 717 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 HRASLS2Q9NWW9 162 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 RARRES3Q9UL19 164 aa12.69□□□□□ -0.38
HMGCS1-205ENST00000508319 IGLV3-16A0A075B6K0 115 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 RALBP11234 206 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 HADHAP40939 763 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 GDF10P55107 478 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 TMPRSS15P98073 1019 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 ACY1Q03154 408 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 KLF1Q13351 362 aaPredicted RBP12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 ZNF658BQ4V348 819 aaPredicted RBP12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 CAPRIN2Q6IMN6 1127 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 SNX20Q7Z614 316 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 OOSP2Q86WS3 158 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 TMEM139Q8IV31 216 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 D2HGDHQ8N465 521 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 HM13Q8TCT9 377 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 CT55Q8WUE5 264 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 ULK4Q96C45 1275 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 DNAJC1Q96KC8 554 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 PPM1MQ96MI6 270 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 FCRL4Q96PJ5 515 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 RBSNQ9H1K0 784 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 EPN3Q9H201 632 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 FAM96AQ9H5X1 160 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 PDE7BQ9NP56 450 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 LHX9Q9NQ69 397 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 FGF21Q9NSA1 209 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 FEZ2Q9UHY8 353 aaPredicted RBP12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 PACSIN2Q9UNF0 486 aaPredicted RBP12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 PCDHGA6Q9Y5G7 932 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 KCNMB2Q9Y691 235 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 NAV2Q8IVL1 2488 aa12.68□□□□□ -0.38
HMGCS1-205ENST00000508319 DOPEY2Q9Y3R5 2298 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 TRBV5-4A0A0C4DH59 114 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 A0A0U1RQJ8 604 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 UBA6A0AVT1 1052 aaPredicted RBP12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 OR6C74A6NCV1 312 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 H7C0S8 307 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 ZNF189O75820 626 aaPredicted RBP12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 MT-ND3P03897 115 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 POLBP06746 335 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 CCNYL3P0C7X3 344 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 ATP1B2P14415 290 aaPredicted RBP12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 MC4RP32245 332 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 CETN2P41208 172 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 KPNA2P52292 529 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 HSD11B2P80365 405 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 DNASE1L3Q13609 305 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 ERV3-1Q14264 604 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 SKIDA1Q1XH10 827 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms