RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 RNF11Q9Y3C5 154 aa21.67■■□□□ 1.06
SPCS3-203ENST00000507678 HSD17B1P14061 328 aa21.67■■□□□ 1.06
SPCS3-203ENST00000507678 IL10P22301 178 aa21.67■■□□□ 1.06
SPCS3-203ENST00000507678 GGT5P36269 586 aa21.67■■□□□ 1.06
SPCS3-203ENST00000507678 PPP3CCP48454 512 aa21.67■■□□□ 1.06
SPCS3-203ENST00000507678 RGS4P49798 205 aa21.67■■□□□ 1.06
SPCS3-203ENST00000507678 MTPNP58546 118 aa21.67■■□□□ 1.06
SPCS3-203ENST00000507678 HMGCS1Q01581 520 aa21.67■■□□□ 1.06
SPCS3-203ENST00000507678 NADK2Q4G0N4 442 aa21.67■■□□□ 1.06
SPCS3-203ENST00000507678 NANOGP8Q6NSW7 305 aa21.67■■□□□ 1.06
SPCS3-203ENST00000507678 RBM44Q6ZP01 1051 aaKnown RBP21.67■■□□□ 1.06
SPCS3-203ENST00000507678 ERMP1Q7Z2K6 904 aa21.67■■□□□ 1.06
SPCS3-203ENST00000507678 ZNF597Q96LX8 424 aa21.67■■□□□ 1.06
SPCS3-203ENST00000507678 NANOGQ9H9S0 305 aa21.67■■□□□ 1.06
SPCS3-203ENST00000507678 PFDN4Q9NQP4 134 aa21.67■■□□□ 1.06
SPCS3-203ENST00000507678 ABCB8Q9NUT2 735 aa21.67■■□□□ 1.06
SPCS3-203ENST00000507678 SPG21Q9NZD8 308 aa21.67■■□□□ 1.06
SPCS3-203ENST00000507678 INTS6Q9UL03 887 aaKnown RBP21.67■■□□□ 1.06
SPCS3-203ENST00000507678 TAPBPO15533 448 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 PABPC4LP0CB38 370 aaKnown RBP21.66■■□□□ 1.06
SPCS3-203ENST00000507678 SLC2A4P14672 509 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 RPL38P63173 70 aaKnown RBP21.66■■□□□ 1.06
SPCS3-203ENST00000507678 DET1Q7L5Y6 550 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 TCEAL8Q8IYN2 117 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 NCSTNQ92542 709 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 FAM126AQ9BYI3 521 aaPredicted RBP21.66■■□□□ 1.06
SPCS3-203ENST00000507678 ATP13A3Q9H7F0 1226 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 ACTR3BQ9P1U1 418 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 DNMT3BQ9UBC3 853 aaKnown RBP21.66■■□□□ 1.06
SPCS3-203ENST00000507678 KLQ9UEF7 1012 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 RNF103-CHMP3A0A140T963 221 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 HNRNPRO43390 633 aaKnown RBP21.66■■□□□ 1.06
SPCS3-203ENST00000507678 HTRA2O43464 458 aaPredicted RBP21.66■■□□□ 1.06
SPCS3-203ENST00000507678 AP1G1O43747 822 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 RSL1D1O76021 490 aaKnown RBP21.66■■□□□ 1.06
SPCS3-203ENST00000507678 CAPNS1P04632 268 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 ACRV1P26436 265 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 PRKG2Q13237 762 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 ARHGEF7Q14155 803 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 GPR26Q8NDV2 337 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 VWCEQ96DN2 955 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 TRIM54Q9BYV2 358 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 BRINP2Q9C0B6 783 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 TMEM39AQ9NV64 488 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 ZNHIT2Q9UHR6 403 aa21.66■■□□□ 1.06
SPCS3-203ENST00000507678 EEDO75530 441 aaKnown RBP21.65■■□□□ 1.06
SPCS3-203ENST00000507678 MAGEA10P43363 369 aaPredicted RBP21.65■■□□□ 1.06
SPCS3-203ENST00000507678 BNIP2Q12982 314 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 PTGR1Q14914 329 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 CNKSR3Q6P9H4 555 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 CYP20A1Q6UW02 462 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 CMTR2Q8IYT2 770 aaKnown RBP21.65■■□□□ 1.06
SPCS3-203ENST00000507678 AHI1Q8N157 1196 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 ZBTB2Q8N680 514 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 FAM8A1Q9UBU6 413 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 CD84Q9UIB8 345 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 DOCK6Q96HP0 2047 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 MYOFQ9NZM1 2061 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 TGM5O43548 720 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 SEC24DO94855 1032 aaPredicted RBP21.65■■□□□ 1.06
SPCS3-203ENST00000507678 IGSF6O95976 241 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 LSAMPQ13449 338 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 PLEKHG6Q3KR16 790 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 SLC44A4Q53GD3 710 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 DNAJC14Q6Y2X3 702 aaPredicted RBP21.65■■□□□ 1.06
SPCS3-203ENST00000507678 ITIH5Q86UX2 942 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 CHERPQ8IWX8 916 aaKnown RBP21.65■■□□□ 1.06
SPCS3-203ENST00000507678 ZUFSPQ96AP4 578 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 ARMC1Q9NVT9 282 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 HSFX1Q9UBD0 423 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 TMCO1Q9UM00 188 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 OAZ3Q9UMX2 235 aa21.65■■□□□ 1.06
SPCS3-203ENST00000507678 TNPO3Q9Y5L0 923 aaKnown RBP21.65■■□□□ 1.06
SPCS3-203ENST00000507678 KRT87PA6NCN2 255 aa21.64■■□□□ 1.06
SPCS3-203ENST00000507678 ZNF821O75541 412 aaPredicted RBP21.64■■□□□ 1.06
SPCS3-203ENST00000507678 ACRP10323 421 aa21.64■■□□□ 1.06
SPCS3-203ENST00000507678 CD9P21926 228 aa21.64■■□□□ 1.06
SPCS3-203ENST00000507678 RPL5P46777 297 aaKnown RBP21.64■■□□□ 1.06
SPCS3-203ENST00000507678 TRAF3Q13114 568 aa21.64■■□□□ 1.06
SPCS3-203ENST00000507678 SELPLGQ14242 412 aa21.64■■□□□ 1.06
SPCS3-203ENST00000507678 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.64■■□□□ 1.06
SPCS3-203ENST00000507678 PDCD4Q53EL6 469 aaKnown RBP21.64■■□□□ 1.06
SPCS3-203ENST00000507678 CORO1BQ9BR76 489 aa21.64■■□□□ 1.06
SPCS3-203ENST00000507678 HERC2P3Q9BVR0 1158 aa21.64■■□□□ 1.06
SPCS3-203ENST00000507678 OSBPL11Q9BXB4 747 aa21.64■■□□□ 1.06
SPCS3-203ENST00000507678 ZDHHC6Q9H6R6 413 aa21.64■■□□□ 1.06
SPCS3-203ENST00000507678 HECAQ9UBI9 543 aaPredicted RBP21.64■■□□□ 1.06
SPCS3-203ENST00000507678 CNOT11Q9UKZ1 510 aaKnown RBP21.64■■□□□ 1.06
SPCS3-203ENST00000507678 PIKFYVEQ9Y2I7 2098 aa21.64■■□□□ 1.06
SPCS3-203ENST00000507678 ZFC3H1O60293 1989 aaKnown RBP21.64■■□□□ 1.05
SPCS3-203ENST00000507678 FAM234BA2RU67 622 aa21.64■■□□□ 1.05
SPCS3-203ENST00000507678 LSM1O15116 133 aaKnown RBP21.64■■□□□ 1.05
SPCS3-203ENST00000507678 OTCP00480 354 aa21.64■■□□□ 1.05
SPCS3-203ENST00000507678 GNAO1P09471 354 aa21.64■■□□□ 1.05
SPCS3-203ENST00000507678 DGKAP23743 735 aa21.64■■□□□ 1.05
SPCS3-203ENST00000507678 FASP25445 335 aa21.64■■□□□ 1.05
SPCS3-203ENST00000507678 VEGFBP49765 207 aa21.64■■□□□ 1.05
SPCS3-203ENST00000507678 PCBP2Q15366 365 aaKnown RBP eCLIP21.64■■□□□ 1.05
SPCS3-203ENST00000507678 LRRC66Q68CR7 880 aa21.64■■□□□ 1.05
SPCS3-203ENST00000507678 LCN8Q6JVE9 175 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms