RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 NXPE1Q8N323 547 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 LRRC57Q8N9N7 239 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 CCDC110Q8TBZ0 833 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 C12orf66Q96MD2 445 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 ALS2CR12Q96Q35 445 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 FRMD8P1Q9BZ68 369 aaPredicted RBP14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 CLMPQ9H6B4 373 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 KIR3DX1Q9H7L2 352 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 FKBPLQ9UIM3 349 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 TFR2Q9UP52 801 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 UBA6A0AVT1 1052 aaPredicted RBP14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 GRID2IPA4D2P6 1211 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 RCCD1A6NED2 376 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 ERI2A8K979 691 aaKnown RBP14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 IFRD1O00458 451 aaPredicted RBP14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 SUV39H1O43463 412 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 SPAG6O75602 509 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 ZBTB11O95625 1053 aaPredicted RBP14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 GAS8O95995 478 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 ATP1B2P14415 290 aaPredicted RBP14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 STIP1P31948 543 aaKnown RBP14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 DLSTP36957 453 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 CD151P48509 253 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 ZNF140P52738 457 aaPredicted RBP14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 HSD11B2P80365 405 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 XIAPP98170 497 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 RPA4Q13156 261 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 TUBB3Q13509 450 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 RAD9BQ6WBX8 426 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 FAM92BQ6ZTR7 304 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 RNF10Q8N5U6 811 aaKnown RBP14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 STYXQ8WUJ0 223 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 GORASP1Q9BQQ3 440 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 LACRTQ9GZZ8 138 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 WWP1Q9H0M0 922 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 LATS2Q9NRM7 1088 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 HRASLS2Q9NWW9 162 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 ZDHHC3Q9NYG2 299 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 SLC24A2Q9UI40 661 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 LNPEPQ9UIQ6 1025 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 ANAPC2Q9UJX6 822 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 PSMD13Q9UNM6 376 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 PCDHGA6Q9Y5G7 932 aa14.09□□□□□ -0.15
HMGCS1-203ENST00000507004 NKX2-8O15522 239 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 KIAA0754O94854 1291 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 AP2A2O94973 939 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 PBLDP30039 288 aaPredicted RBP14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 SH3BP2P78314 561 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 PLOD1Q02809 727 aaPredicted RBP14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 MSLNQ13421 630 aaPredicted RBP14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 CAPRIN2Q6IMN6 1127 aaKnown RBP14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 FAM83HQ6ZRV2 1179 aaPredicted RBP14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 DET1Q7L5Y6 550 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 CFAP206Q8IYR0 622 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 D2HGDHQ8N465 521 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 ACVR1CQ8NER5 493 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 GPR150Q8NGU9 434 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 C9orf43Q8TAL5 461 aaPredicted RBP14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 ALG3Q92685 438 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 INSM2Q96T92 566 aaPredicted RBP14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 TTC1Q99614 292 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 APOL2Q9BQE5 337 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 GPR87Q9BY21 358 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 FANCEQ9HB96 536 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 POLHQ9Y253 713 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 REXO2Q9Y3B8 237 aaKnown RBP14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 DUSP10Q9Y6W6 482 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 KALRNO60229 2985 aa14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 ZNF106Q9H2Y7 1883 aaKnown RBP14.08□□□□□ -0.16
HMGCS1-203ENST00000507004 PIEZO2Q9H5I5 2752 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 IGLV3-16A0A075B6K0 115 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 TRBV5-4A0A0C4DH59 114 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 GPR39O43194 453 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 LDB2O43679 373 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 KIF1CO43896 1103 aaKnown RBP14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 KDM1AO60341 852 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 MC4RP32245 332 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 TUBB4BP68371 445 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 CACNG1Q06432 222 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 TUBB2AQ13885 445 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 ITIH4Q14624 930 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 SKIDA1Q1XH10 827 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 KCTD11Q693B1 232 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 DENND5AQ6IQ26 1287 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 GALNT6Q8NCL4 622 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 OR13C4Q8NGS5 318 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 SLC35B2Q8TB61 432 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.07□□□□□ -0.161e-6■■■■■ 26.8
HMGCS1-203ENST00000507004 LRFN5Q96NI6 719 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 MAP3K3Q99759 626 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 TUBB2BQ9BVA1 445 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 TSGA10Q9BZW7 698 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 RBSNQ9H1K0 784 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 MVB12BQ9H7P6 319 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 C10orf88Q9H8K7 445 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 LHX9Q9NQ69 397 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 C1GALT1Q9NS00 363 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 FGF21Q9NSA1 209 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 NLE1Q9NVX2 485 aaPredicted RBP14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 IL17BQ9UHF5 180 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms