RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 SCIMPQ6UWF3 145 aa16.86■□□□□ 0.29
SQSTM1-211ENST00000506690 SLC22A15Q8IZD6 547 aa16.86■□□□□ 0.29
SQSTM1-211ENST00000506690 FBXO39Q8N4B4 442 aa16.86■□□□□ 0.29
SQSTM1-211ENST00000506690 SETD9Q8NE22 299 aa16.86■□□□□ 0.29
SQSTM1-211ENST00000506690 ZNF548Q8NEK5 533 aaPredicted RBP16.86■□□□□ 0.29
SQSTM1-211ENST00000506690 OR2T12Q8NG77 320 aa16.86■□□□□ 0.29
SQSTM1-211ENST00000506690 OR7G1Q8NGA0 311 aa16.86■□□□□ 0.29
SQSTM1-211ENST00000506690 OR52E4Q8NGH9 312 aa16.86■□□□□ 0.29
SQSTM1-211ENST00000506690 ITCHQ96J02 903 aa16.86■□□□□ 0.29
SQSTM1-211ENST00000506690 TSPAN18Q96SJ8 248 aa16.86■□□□□ 0.29
SQSTM1-211ENST00000506690 NXF3Q9H4D5 531 aaKnown RBP16.86■□□□□ 0.29
SQSTM1-211ENST00000506690 PNMA8BQ9ULN7 279 aaPredicted RBP16.86■□□□□ 0.29
SQSTM1-211ENST00000506690 INVSQ9Y283 1065 aa16.86■□□□□ 0.29
SQSTM1-211ENST00000506690 COL1A2P08123 1366 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 SMIM28A0A1B0GU29 152 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 METTL15A6NJ78 407 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 NOTOA8MTQ0 251 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 EFCAB9A8MZ26 197 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 IDH3BO43837 385 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 PGK2P07205 417 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 TUBA1BP68363 451 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 CES5AQ6NT32 575 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 TUBA1AQ71U36 451 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 TOP6BLQ8N6T0 577 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 FNDC5Q8NAU1 212 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 FAM83FQ8NEG4 500 aaPredicted RBP16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 PROX1Q92786 737 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 KIAA1191Q96A73 305 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 ACOX2Q99424 681 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 SMOQ99835 787 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 DCSTAMPQ9H295 470 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 GOLGA2P5Q9HBQ8 144 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 SUPT3HB4E1H0 165 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 CCNKO75909 580 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 FADS2O95864 444 aaKnown RBP16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 LGALS2P05162 132 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 HOXB8P17481 243 aaPredicted RBP16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 PFKLP17858 780 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 UGT2B10P36537 528 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 E2F2Q14209 437 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 SMUG1Q53HV7 270 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 FBXO48Q5FWF7 155 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 RSBN1Q5VWQ0 802 aaPredicted RBP16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 TIGD7Q6NT04 549 aaPredicted RBP16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 TAC4Q86UU9 113 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 ZMIZ2Q8NF64 920 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 C1QTNF3Q9BXJ4 246 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 SLC25A51Q9H1U9 297 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 ACTL8Q9H568 366 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 EPS8L2Q9H6S3 715 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 SCN3BQ9NY72 215 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 ORC6Q9Y5N6 252 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 HSPE1-MOB4S4R3N1 261 aa16.85■□□□□ 0.29
SQSTM1-211ENST00000506690 GSTA4O15217 222 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 MRPS14O60783 128 aaKnown RBP16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 DDNO94850 711 aaPredicted RBP16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 HOXD8P13378 290 aaPredicted RBP16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 CD36P16671 472 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 AKAP5P24588 427 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 TRPC1P48995 793 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 LILRA4P59901 499 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 YWHAHQ04917 246 aaPredicted RBP16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 SOX4Q06945 474 aaPredicted RBP16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 GBX1Q14549 363 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 FAM209AQ5JX71 171 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 CAPN13Q6MZZ7 669 aaPredicted RBP16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 PNCKQ6P2M8 343 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 TTC23LQ6PF05 361 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 CCBE1Q6UXH8 406 aaPredicted RBP16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 DLK2Q6UY11 383 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 SULF1Q8IWU6 871 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 FAM126BQ8IXS8 530 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 CHPFQ8IZ52 775 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 METTL4Q8N3J2 472 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 IL17RDQ8NFM7 739 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 STAG3L4Q8TBR4 150 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 GIPC2Q8TF65 315 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 GAD1Q99259 594 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 MARCH7Q9H992 704 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 HEBP1Q9NRV9 189 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 NDFIP2Q9NV92 336 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 TMEM30AQ9NV96 361 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 OSER1Q9NX31 292 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 VAPAQ9P0L0 249 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 TBC1D14Q9P2M4 693 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 PCDHGA3Q9Y5H0 932 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 SPO11Q9Y5K1 396 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 N6AMT1Q9Y5N5 214 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 HOXC13P31276 330 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 AGAP6Q5VW22 663 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 Q6ZSR9 355 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 DPP9Q86TI2 863 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 HIPK1Q86Z02 1210 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 AGAP4Q96P64 663 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 SNX18Q96RF0 628 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 RHNO1Q9BSD3 238 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 SIK2Q9H0K1 926 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 NPAP1Q9NZP6 1156 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 AASSQ9UDR5 926 aa16.84■□□□□ 0.29
SQSTM1-211ENST00000506690 A3GALT2U3KPV4 340 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms