RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 NETO1Q8TDF5 533 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 DENND1AQ8TEH3 1009 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 ASB11Q8WXH4 323 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 DUSP23Q9BVJ7 150 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 GMEB2Q9UKD1 530 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 PCDHGA1Q9Y5H4 931 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 OTOGLQ3ZCN5 2332 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 NUDT21O43809 227 aaKnown RBP8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 COL6A2P12110 1019 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 CTBP1Q13363 440 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 SLC29A2Q14542 456 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 CLCA4Q14CN2 919 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 METTL2BQ6P1Q9 378 aaKnown RBP8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 MINDY1Q8N5J2 469 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 ARL10Q8N8L6 244 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 UBXN4Q92575 508 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 INPP5DQ92835 1189 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 VPS39Q96JC1 886 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 GSDMCQ9BYG8 508 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 POT1Q9NUX5 634 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 FAM53CQ9NYF3 392 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 TAAR2Q9P1P5 351 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 PLEKHM1Q9Y4G2 1056 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 OR5K4A6NMS3 321 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 H3BMH7 237 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 TRIM38O00635 465 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 ITGA2BP08514 1039 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 F3P13726 295 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 MSH3P20585 1137 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 ACADVLP49748 655 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 TMPRSS15P98073 1019 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 RELAQ04206 551 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 DLG1Q12959 904 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 SBSNQ6UWP8 590 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 ENPP7Q6UWV6 458 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 SDCCAG8Q86SQ7 713 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 AVL9Q8NBF6 648 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 OR5K2Q8NHB8 316 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 RHEBL1Q8TAI7 183 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 TLCD1Q96CP7 247 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 CFAP36Q96G28 342 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 CRLS1Q9UJA2 301 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 EME2A4GXA9 379 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 OR56A5P0C7T3 313 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 ENO3P13929 434 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 NFKB2Q00653 900 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 ZRANB3Q5FWF4 1079 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 LRRC8EQ6NSJ5 796 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 TMEM220Q6QAJ8 160 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 GKN2Q86XP6 184 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 GALNT13Q8IUC8 556 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 OR6C4Q8NGE1 309 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 CCL4L1Q8NHW4 92 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 PIGKQ92643 395 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 TSACCQ96A04 125 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 PGM2Q96G03 612 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 PANX3Q96QZ0 392 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 PAFAH2Q99487 392 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 SLC40A1Q9NP59 571 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 FBXO6Q9NRD1 293 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 APOBEC3BQ9UH17 382 aaKnown RBP8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 MTO1Q9Y2Z2 717 aaKnown RBP8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 ACTL7BQ9Y614 415 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 UBA6A0AVT1 1052 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 ENO2P09104 434 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 MTHFD1P11586 935 aaKnown RBP8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 JUNDP17535 347 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 PDX1P52945 283 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 C21orf59P57076 290 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 ZNF844Q08AG5 666 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 TCEAL6Q6IPX3 200 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 PNPLA1Q8N8W4 532 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 TCEAL3Q969E4 200 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.1□□□□□ -1.112e-6■■■■■ 41.8
CDC42SE2-208ENST00000505065 SARGQ9BW04 601 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 B3GNT4Q9C0J1 378 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 GAREM1Q9H706 876 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 FAM86C1Q9NVL1 165 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 EPHA6Q9UF33 1036 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 POP7O75817 140 aaKnown RBP8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 ANKRD34CP0C6C1 535 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 RALBP11234 206 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 EIF3BP55884 814 aaKnown RBP8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 SF3A2Q15428 464 aaKnown RBP8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 RPE65Q16518 533 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 ARMCX6Q7L4S7 300 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 LDB1Q86U70 411 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 ARHGEF39Q8N4T4 335 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 GABPB2Q8TAK5 448 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 IFT81Q8WYA0 676 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 TSSK1BQ9BXA7 367 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 FSCN3Q9NQT6 498 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 ZNF446Q9NWS9 450 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 VWA7Q9Y334 891 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 F8W8V4 182 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 INPP4BO15327 924 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 CAPNS1P04632 268 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 CD1DP15813 335 aa8.1□□□□□ -1.11
CDC42SE2-208ENST00000505065 C14orf28Q4W4Y0 310 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms