RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ZDHHC13Q8IUH4 622 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 SPPL2CQ8IUH8 684 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 CHST14Q8NCH0 376 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 ACTRT2Q8TDY3 377 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 SLC39A3Q9BRY0 314 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 ZNF334Q9HCZ1 680 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-207ENST00000504761 EXOSC4Q9NPD3 245 aaKnown RBP13.88□□□□□ -0.19
TCOF1-207ENST00000504761 GULP1Q9UBP9 304 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 K7EPI3 171 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 PAK4O96013 591 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-207ENST00000504761 IFNA14P01570 189 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 ZNF37AP17032 561 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-207ENST00000504761 ANXA11P50995 505 aaKnown RBP13.88□□□□□ -0.19
TCOF1-207ENST00000504761 IL5RAQ01344 420 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 COL9A2Q14055 689 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-207ENST00000504761 SPIDRQ14159 915 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 LPGAT1Q92604 370 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 AKTIPQ9H8T0 292 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 C6orf203Q9P0P8 240 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-207ENST00000504761 SIRPGQ9P1W8 387 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 PPM1HQ9ULR3 514 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 HHLA1C9JL84 531 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 ATP1B2P14415 290 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-207ENST00000504761 KELP23276 732 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 VIPR1P32241 457 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 KIR3DL1P43629 444 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 RAD23AP54725 363 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 FAM189BP81408 668 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 NFATC2Q13469 925 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 ZNF549Q6P9A3 640 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 NXPE1Q8N323 547 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 C12orf66Q96MD2 445 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 QRFPRQ96P65 431 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 NKX2-4Q9H2Z4 354 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 RERGLQ9H628 205 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 CCDC177Q9NQR7 707 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-207ENST00000504761 U3KQV3 271 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 PTPRZ1P23471 2315 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-207ENST00000504761 DHRS12A0PJE2 317 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 GPR39O43194 453 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 ZW10O43264 779 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 TIPRLO75663 272 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 POP7O75817 140 aaKnown RBP13.87□□□□□ -0.19
TCOF1-207ENST00000504761 ANXA4P09525 319 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-207ENST00000504761 RGRP47804 291 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 CDKN2DP55273 166 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 ERVFC1P60507 584 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 RAB30Q15771 203 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 SNAP47Q5SQN1 464 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 LDLRAP1Q5SW96 308 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 SPESP1Q6UW49 350 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 NSUN5Q96P11 429 aaKnown RBP13.87□□□□□ -0.19
TCOF1-207ENST00000504761 SCN3BQ9NY72 215 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 PRPF19Q9UMS4 504 aaKnown RBP13.87□□□□□ -0.19
TCOF1-207ENST00000504761 NUP205Q92621 2012 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 LCHNA4D1U4 455 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 STX16-NPEPL1H3BU86 382 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 CHRM1P11229 460 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-207ENST00000504761 TCAIMQ8N3R3 496 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 LIX1Q8N485 282 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 LINC01599Q8WXQ3 324 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 ABTB1Q969K4 478 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-207ENST00000504761 RAD51AP1Q96B01 352 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 CEP19Q96LK0 163 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 NLNQ9BYT8 704 aa13.87□□□□□ -0.19
TCOF1-207ENST00000504761 EME2A4GXA9 379 aaPredicted RBP13.86□□□□□ -0.19
TCOF1-207ENST00000504761 B4GALT3O60512 393 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 HPGDP15428 266 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 NELFEP18615 380 aaKnown RBP13.86□□□□□ -0.19
TCOF1-207ENST00000504761 CTSOP43234 321 aaPredicted RBP13.86□□□□□ -0.19
TCOF1-207ENST00000504761 LEPRP48357 1165 aaKnown RBP13.86□□□□□ -0.19
TCOF1-207ENST00000504761 INPP1P49441 399 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 TGFBIQ15582 683 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 FAM174BQ3ZCQ3 159 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 SPATA19Q7Z5L4 167 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 EID3Q8N140 333 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 OR2T12Q8NG77 320 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 DLG3Q92796 817 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 THAP11Q96EK4 314 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 PTCD3Q96EY7 689 aaKnown RBP13.86□□□□□ -0.19
TCOF1-207ENST00000504761 ADPRHL2Q9NX46 363 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 PRKAG3Q9UGI9 489 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 PLK4O00444 970 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 GNAZP19086 355 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 CPTPQ5TA50 214 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 C10orf53Q8N6V4 93 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 DENND1AQ8TEH3 1009 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 PPCDCQ96CD2 204 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 WDR26Q9H7D7 661 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 FAM149AA5PLN7 773 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 PTGES3LE9PB15 166 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 TULP3O75386 442 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 CLPTM1O96005 669 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 C8GP07360 202 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 RRM2P31350 389 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 STEAP4Q687X5 459 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 TMEM26Q6ZUK4 368 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 MRPL43Q8N983 215 aaKnown RBP13.86□□□□□ -0.19
TCOF1-207ENST00000504761 OR9Q1Q8NGQ5 310 aa13.86□□□□□ -0.19
TCOF1-207ENST00000504761 ZSCAN5AQ9BUG6 496 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms