RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 FOXO6A8MYZ6 492 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 SOCS6O14544 535 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 CCP110O43303 1012 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 MTX2O75431 263 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 SLCO2B1O94956 709 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 ZNF202O95125 648 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 RASAL1O95294 804 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 F10P00742 488 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 HEXAP06865 529 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 INHBBP09529 407 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 IGFBP2P18065 325 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 GPD1P21695 349 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 PCSK6P29122 969 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 SPINT3P49223 89 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 TNFSF10P50591 281 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 BPIFB4P59827 614 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 ZNF569Q5MCW4 686 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 ATL3Q6DD88 541 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 KLHL10Q6JEL2 608 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 TTI2Q6NXR4 508 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 ZNF547Q8IVP9 402 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 CARFQ8N187 725 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 DNAAF3Q8N9W5 541 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 ZNF599Q96NL3 588 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 MGME1Q9BQP7 344 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 SYTL2Q9HCH5 934 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 CDC23Q9UJX2 597 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 DNAJC12Q9UKB3 198 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 CFAP20Q9Y6A4 193 aaKnown RBP12.13□□□□□ -0.47
LSM6-204ENST00000504181 CHD3Q12873 2000 aaKnown RBP12.13□□□□□ -0.47
LSM6-204ENST00000504181 ZANQ9Y493 2812 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 C1orf232A0A0U1RR37 186 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 DYTNA2CJ06 578 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 GPR89AB7ZAQ6 455 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 EEF2KO00418 725 aaKnown RBP12.12□□□□□ -0.47
LSM6-204ENST00000504181 FZD6O60353 706 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 ZWINTO95229 277 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 LSM8O95777 96 aaKnown RBP12.12□□□□□ -0.47
LSM6-204ENST00000504181 MMEP08473 750 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 CD63P08962 238 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 GPR89BP0CG08 455 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 ZSCAN22P10073 491 aaPredicted RBP12.12□□□□□ -0.47
LSM6-204ENST00000504181 POLR2CP19387 275 aaPredicted RBP12.12□□□□□ -0.47
LSM6-204ENST00000504181 UGT1A4P22310 534 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 DCDP81605 110 aaKnown RBP12.12□□□□□ -0.47
LSM6-204ENST00000504181 PMP22Q01453 160 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 STIM1Q13586 685 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 GALNT3Q14435 633 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 RPE65Q16518 533 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 CES4AQ5XG92 561 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 ISM2Q6H9L7 571 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 MRPL14Q6P1L8 145 aaKnown RBP12.12□□□□□ -0.47
LSM6-204ENST00000504181 GBP6Q6ZN66 633 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 FAM71AQ8IYT1 594 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 WFDC11Q8NEX6 87 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 TEKT4Q8WW24 435 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 LMF1Q96S06 567 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 C11orf70Q9BRQ4 267 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 SPATA16Q9BXB7 569 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 KLHL25Q9H0H3 589 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 SIX2Q9NPC8 291 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 SAMSN1Q9NSI8 373 aaKnown RBP12.12□□□□□ -0.47
LSM6-204ENST00000504181 DNAJB12Q9NXW2 375 aaKnown RBP12.12□□□□□ -0.47
LSM6-204ENST00000504181 PKD2L2Q9NZM6 624 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 DHCR7Q9UBM7 475 aaKnown RBP12.12□□□□□ -0.47
LSM6-204ENST00000504181 PLEKHA6Q9Y2H5 1048 aa12.12□□□□□ -0.47
LSM6-204ENST00000504181 DAPK3O43293 454 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 PRAMEF2O60811 474 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 KRT3P12035 628 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 ST6GAL1P15907 406 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 ERCC2P18074 760 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 VCLP18206 1134 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 MMP11P24347 488 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 DNASE1P24855 282 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 PON1P27169 355 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 HTR7P34969 479 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 MYBPHQ13203 477 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 PCOLCEQ15113 449 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 EXOC3L4Q17RC7 722 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 TUBB8Q3ZCM7 444 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 ALS2CLQ60I27 953 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 WDR59Q6PJI9 974 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 GPR135Q8IZ08 494 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 DHTKD1Q96HY7 919 aaPredicted RBP12.11□□□□□ -0.47
LSM6-204ENST00000504181 GSDMAQ96QA5 445 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 ALPK1Q96QP1 1244 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.11□□□□□ -0.47
LSM6-204ENST00000504181 NPDC1Q9NQX5 325 aaPredicted RBP12.11□□□□□ -0.47
LSM6-204ENST00000504181 C1GALT1Q9NS00 363 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 IMP3Q9NV31 184 aaKnown RBP12.11□□□□□ -0.47
LSM6-204ENST00000504181 POMT2Q9UKY4 750 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 DNPEPQ9ULA0 475 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 ZNF835Q9Y2P0 537 aa12.11□□□□□ -0.47
LSM6-204ENST00000504181 SCN2AQ99250 2005 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 C17orf113A0A1B0GUU1 675 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 VEGFDO43915 354 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 GNA14O95837 355 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 PEX11BO96011 259 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 MSL3P1P0C860 447 aa12.1□□□□□ -0.47
LSM6-204ENST00000504181 UNGP13051 313 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms