RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 CHST15Q7LFX5 561 aaPredicted RBP16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 ZZZ3Q8IYH5 903 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 FBXO22Q8NEZ5 403 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 PHF11Q9UIL8 331 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 SAGP10523 405 aaPredicted RBP16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 TCF4P15884 667 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 RGS8P57771 180 aaPredicted RBP16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 FBXO48Q5FWF7 155 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 LRTOMTQ8WZ04 291 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 ZNF599Q96NL3 588 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 WRAP53Q9BUR4 548 aaKnown RBP16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 PIGUQ9H490 435 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 ATRNL1Q5VV63 1379 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 FAM149AA5PLN7 773 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 AGRPO00253 132 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 COL6A1P12109 1028 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 PSMA1P25786 263 aaKnown RBP16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 RAB25P57735 213 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 CLEC20AQ6ZU45 233 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 BCL2L14Q9BZR8 327 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 EXO5Q9H790 373 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 RUVBL1Q9Y265 456 aaKnown RBP16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 HCAR3P49019 387 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 RAPSNQ13702 412 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 HEPACAMQ14CZ8 416 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 KHDC1Q4VXA5 237 aaKnown RBP16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 LDLRAP1Q5SW96 308 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 OR10H5Q8NGA6 315 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 DNASE1L2Q92874 299 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 GORASP1Q9BQQ3 440 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 TRMUO75648 421 aaKnown RBP16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 TIGD5Q53EQ6 642 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 FAAH2Q6GMR7 532 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 OR14C36Q8NHC7 312 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 ZNF384Q8TF68 577 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 SLC9A6Q92581 669 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 POLR3BQ9NW08 1133 aaPredicted RBP16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 CAPN15O75808 1086 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 ZBTB46Q86UZ6 589 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 JAZF1Q86VZ6 243 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 SLC13A3Q8WWT9 602 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 ING3Q9NXR8 418 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 GPN3Q9UHW5 284 aaPredicted RBP16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 NT5EP21589 574 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 FAUP35544 74 aaKnown RBP16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 RPS14P62263 151 aaKnown RBP16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 BNC1Q01954 994 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 DPY19L1Q2PZI1 675 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 CRYBG2Q8N1P7 616 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 FLCNQ8NFG4 579 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 OR10A6Q8NH74 314 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 ADAMTSL3P82987 1691 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 M0R2N6 131 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 CXCR6O00574 342 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 PRR5P85299 388 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 GAD2Q05329 585 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 RALGPS1Q5JS13 557 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 ATAT1Q5SQI0 421 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 TMEM220Q6QAJ8 160 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 TMEM110Q86TL2 294 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 FCRL4Q96PJ5 515 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 OSBPL2Q9H1P3 480 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 FNIP2Q9P278 1114 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 POMPQ9Y244 141 aa16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 GPC6Q9Y625 555 aaPredicted RBP16.31■□□□□ 0.2
PCDHA1-203ENST00000504120 PLOD3O60568 738 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 CD247P20963 164 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 IGFALSP35858 605 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 ZNF155Q12901 538 aaPredicted RBP16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 SNX20Q7Z614 316 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 MCUBQ9NWR8 336 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 ATXN10Q9UBB4 475 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 CLDN4O14493 209 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 SLC35G6P0C7Q6 338 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 CREB1P16220 341 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 GNAZP19086 355 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 SDC2P34741 201 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 BCAP31P51572 246 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 FAR1Q8WVX9 515 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 FBXL18Q96ME1 805 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 KLHL32Q96NJ5 620 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 RBPJLQ9UBG7 517 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 FAM234BA2RU67 622 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 C9JVG2 144 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 OR1F1O43749 312 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 CCNB2O95067 398 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 PEX2P28328 305 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 DGKGP49619 791 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 CD99L2Q8TCZ2 262 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 KCTD13Q8WZ19 329 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 ZDHHC4Q9NPG8 344 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 TLL2Q9Y6L7 1015 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 STX16-NPEPL1H3BU86 382 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 STX16O14662 325 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 CCR10P46092 362 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 ERVK-21P61565 698 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 HERVK_113P63132 956 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 ILF3Q12906 894 aaKnown RBP eCLIP16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 GPR65Q8IYL9 337 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms