RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 C1orf189Q5VU69 101 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 LYPLAL1Q5VWZ2 237 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 PAPD7Q5XG87 772 aaKnown RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 IYDQ6PHW0 289 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 TMEM26Q6ZUK4 368 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 USP45Q70EL2 814 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 PRSS42Q7Z5A4 293 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 SLFN11Q7Z7L1 901 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 PLXDC1Q8IUK5 500 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 PHYKPLQ8IUZ5 450 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 ARHGAP12Q8IWW6 846 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 GLIS1Q8NBF1 620 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 SLC38A9Q8NBW4 561 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 LPCAT1Q8NF37 534 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 ADAMTS17Q8TE56 1095 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 GRHL3Q8TE85 626 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 ITLN2Q8WWU7 325 aaPredicted RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 THAP4Q8WY91 577 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 CCDC120Q96HB5 630 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 SGSM3Q96HU1 749 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 ZNF514Q96K75 400 aaPredicted RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 ZNF641Q96N77 438 aaPredicted RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 TUBGCP5Q96RT8 1024 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 PEBP4Q96S96 227 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 TRIM56Q9BRZ2 755 aaKnown RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 HERPUD2Q9BSE4 406 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 SELENOOQ9BVL4 669 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 OR2AG1Q9H205 316 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 CLSTN2Q9H4D0 955 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 DHX35Q9H5Z1 703 aaKnown RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 LRRC19Q9H756 370 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 NOD2Q9HC29 1040 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 MLXIPLQ9NP71 852 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 SSU72Q9NP77 194 aaKnown RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 FGF21Q9NSA1 209 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 SEPT11Q9NVA2 429 aaKnown RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 RMND1Q9NWS8 449 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 ZNF624Q9P2J8 865 aaPredicted RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 SLC23A2Q9UGH3 650 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 FOXD3Q9UJU5 478 aaPredicted RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 CFAP45Q9UL16 551 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 G3BP2Q9UN86 482 aaKnown RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 PSMD13Q9UNM6 376 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 FARSAQ9Y285 508 aaKnown RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 B3GNT3Q9Y2A9 372 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 NEU2Q9Y3R4 380 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 PCDHGB6Q9Y5F9 930 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 PDZD2O15018 2839 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 ZFHX3Q15911 3703 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 TRGV8A0A0C4DH27 118 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 C1orf232A0A0U1RR37 186 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 FAM237AA0A1B0GTK4 181 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 ARHGAP42A6NI28 874 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 TMEM150CB9EJG8 249 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 P4HA2O15460 535 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 GRID2O43424 1007 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 PRICKLE3O43900 615 aaPredicted RBP3.54□□□□□ -1.84
USP46-205ENST00000504078 MTA2O94776 668 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 GFPT2O94808 682 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 PGLSO95336 258 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 CLDN7O95471 211 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 HOXC4P09017 264 aaPredicted RBP3.54□□□□□ -1.84
USP46-205ENST00000504078 BRAFP15056 766 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 PVRP15151 417 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 NELFEP18615 380 aaKnown RBP3.54□□□□□ -1.84
USP46-205ENST00000504078 ITGA3P26006 1051 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 CDH5P33151 784 aaPredicted RBP3.54□□□□□ -1.84
USP46-205ENST00000504078 RFC1P35251 1148 aaPredicted RBP3.54□□□□□ -1.84
USP46-205ENST00000504078 MTIF2P46199 727 aaKnown RBP3.54□□□□□ -1.84
USP46-205ENST00000504078 GABRB2P47870 512 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 LMAN1P49257 510 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 ST13P50502 369 aaKnown RBP3.54□□□□□ -1.84
USP46-205ENST00000504078 STC1P52823 247 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 ART1P52961 327 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 EPHB1P54762 984 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 AP1S1P61966 158 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 PDE1BQ01064 536 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 PMP22Q01453 160 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 FMO1Q01740 532 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 OGDHQ02218 1023 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 DSC2Q02487 901 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 KRTAP1-1Q07627 177 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 SQSTM1Q13501 440 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 GALNT3Q14435 633 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 GRM3Q14832 879 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 NCF4Q15080 339 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 TESK1Q15569 626 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 CAMK4Q16566 473 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 SMTNL2Q2TAL5 461 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 KRTAP21-3Q3LHN1 58 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.54□□□□□ -1.84
USP46-205ENST00000504078 KHDC1Q4VXA5 237 aaKnown RBP3.54□□□□□ -1.84
USP46-205ENST00000504078 PPP6R3Q5H9R7 873 aaPredicted RBP3.54□□□□□ -1.84
USP46-205ENST00000504078 ZNF569Q5MCW4 686 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 DNTTIP2Q5QJE6 756 aaKnown RBP3.54□□□□□ -1.84
USP46-205ENST00000504078 DNAJC24Q6P3W2 148 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 GBP6Q6ZN66 633 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 SHISA6Q6ZSJ9 500 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 MICALCLQ6ZW33 695 aa3.54□□□□□ -1.84
USP46-205ENST00000504078 ENOSF1Q7L5Y1 443 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 316.7 ms