RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 STX16-NPEPL1H3BU86 382 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 EEF2KO00418 725 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 PEX10O60683 326 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 RASAL1O95294 804 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 CD4P01730 458 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 ZNF12P17014 697 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 ERCC2P18074 760 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 IMPDH1P20839 514 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 PNPLA4P41247 253 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 LEPRP48357 1165 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 SULT1E1P49888 294 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 CCT8P50990 548 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 EPHA5P54756 1037 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 NME5P56597 212 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 OSTNP61366 133 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 PLOD1Q02809 727 aaPredicted RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 EGR3Q06889 387 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 KCTD2Q14681 263 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 UGP2Q16851 508 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 PPP6R3Q5H9R7 873 aaPredicted RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 SAMD4BQ5PRF9 694 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 CERCAMQ5T4B2 595 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 FAM72AQ5TYM5 149 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 TMEM198Q66K66 360 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 FAM72DQ6L9T8 149 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 IYDQ6PHW0 289 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 CES3Q6UWW8 571 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 PID1Q7Z2X4 250 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 FAM72BQ86X60 149 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 EPHX4Q8IUS5 362 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 CEP97Q8IW35 865 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 TP53INP2Q8IXH6 220 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 RIMKLAQ8IXN7 391 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 KRT78Q8N1N4 520 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 ZBTB8BQ8NAP8 495 aaPredicted RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 BEST2Q8NFU1 509 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 PPTC7Q8NI37 304 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 TBC1D15Q8TC07 691 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 TRAPPC12Q8WVT3 735 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 NXNL1Q96CM4 212 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 CCDC124Q96CT7 223 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 CPB2Q96IY4 423 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 DNAJC1Q96KC8 554 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 BTN2A3PQ96KV6 586 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 NPAS2Q99743 824 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 SLC25A23Q9BV35 468 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 MRPL1Q9BYD6 325 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 NUF2Q9BZD4 464 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 MRPL46Q9H2W6 279 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 SNX25Q9H3E2 840 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 R3HDMLQ9H3Y0 253 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 POFUT1Q9H488 388 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 MROH8Q9H579 483 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 RPF2Q9H7B2 306 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 MAGEE1Q9HCI5 957 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 TNFRSF12AQ9NP84 129 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 CHRAC1Q9NRG0 131 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 IARS2Q9NSE4 1012 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 ARHGEF38Q9NXL2 777 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 GIN1Q9NXP7 522 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 UBQLN1Q9UMX0 589 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 ACOT9Q9Y305 439 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 RWDD3Q9Y3V2 267 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 MTF2Q9Y483 593 aaPredicted RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 TCAF1Q9Y4C2 921 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 SLC30A1Q9Y6M5 507 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 LAMA3Q16787 3333 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 PATJQ8NI35 1801 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 ARHGEF37A1IGU5 675 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 KCNU1A8MYU2 1149 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 E9PQ18 207 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 H0YAE9 185 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 SOCS2O14508 198 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 NRP2O60462 931 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 SNAP91O60641 907 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 CBFA2T3O75081 653 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 LGALS2P05162 132 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 UMPSP11172 480 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 LMO2P25791 158 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 CYP2C18P33260 490 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 GNL1P36915 607 aaPredicted RBP3.88□□□□□ -1.79
CLTC-209ENST00000498711 NAGLUP54802 743 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 PKNOX1P55347 436 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 DAOAP59103 153 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 PITX1P78337 314 aaPredicted RBP3.88□□□□□ -1.79
CLTC-209ENST00000498711 TIAL1Q01085 375 aaKnown RBP eCLIP3.88□□□□□ -1.79
CLTC-209ENST00000498711 ACVR1Q04771 509 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 BNIP2Q12982 314 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 ART3Q13508 389 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 TUBA3CQ13748 450 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 MOGQ16653 247 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 ZNF829Q3KNS6 432 aaPredicted RBP3.88□□□□□ -1.79
CLTC-209ENST00000498711 ZNF792Q3KQV3 632 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 EMC4Q5J8M3 183 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 UBXN11Q5T124 520 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 BTBD8Q5XKL5 378 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 NAPEPLDQ6IQ20 393 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 RANBP10Q6VN20 620 aa3.88□□□□□ -1.79
CLTC-209ENST00000498711 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.88□□□□□ -1.79
CLTC-209ENST00000498711 PIGZQ86VD9 579 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms