RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 GRID2IPA4D2P6 1211 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 POLR1CO15160 346 aaPredicted RBP5.1□□□□□ -1.59
FXN-205ENST00000498653 SPOPO43791 374 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 FBXO24O75426 580 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 PALMO75781 387 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 KIAA0754O94854 1291 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 TOXO94900 526 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 ENDOD1O94919 500 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 APOEP02649 317 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 PGRP06401 933 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 HMBSP08397 361 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 ALPIP09923 528 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 SLC2A3P11169 496 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 COMTP21964 271 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 MST1P26927 711 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 PCK1P35558 622 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 CHKAP35790 457 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 NDST2P52849 883 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 TBX4P57082 545 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 GNG11P61952 73 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 PITX1P78337 314 aaPredicted RBP5.1□□□□□ -1.59
FXN-205ENST00000498653 COG7P83436 770 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 NME3Q13232 169 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 MYBPC3Q14896 1274 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 ZNF169Q14929 603 aaPredicted RBP5.1□□□□□ -1.59
FXN-205ENST00000498653 KYNUQ16719 465 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 CDO1Q16878 200 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 C15orf59Q2T9L4 293 aaPredicted RBP5.1□□□□□ -1.59
FXN-205ENST00000498653 TRNP1Q6NT89 227 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 NEK5Q6P3R8 708 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 SCYL2Q6P3W7 929 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 Q6ZS46 218 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 MED25Q71SY5 747 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 ARHGAP22Q7Z5H3 698 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 TAC4Q86UU9 113 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 DENND1CQ8IV53 801 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 P3H2Q8IVL5 708 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 ZZZ3Q8IYH5 903 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 LRRC75A-AS1Q8N1F1 130 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 AGGF1Q8N302 714 aaeCLIP5.1□□□□□ -1.596e-10■■■■■ 35.6
FXN-205ENST00000498653 SLC35F6Q8N357 371 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 CPXM2Q8N436 756 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 NIPA2Q8N8Q9 360 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 ATP6V0D2Q8N8Y2 350 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 KDM1BQ8NB78 822 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 TRIM58Q8NG06 486 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 GOT1L1Q8NHS2 421 aaPredicted RBP5.1□□□□□ -1.59
FXN-205ENST00000498653 DDI1Q8WTU0 396 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 TM9SF4Q92544 642 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 CENPIQ92674 756 aaPredicted RBP5.1□□□□□ -1.59
FXN-205ENST00000498653 NT5C3BQ969T7 300 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 TTC17Q96AE7 1141 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 DOCK10Q96BY6 2186 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 PGAP3Q96FM1 320 aaPredicted RBP5.1□□□□□ -1.59
FXN-205ENST00000498653 LMLNQ96KR4 655 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 YIPF2Q9BWQ6 316 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 TRIM7Q9C029 511 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 PLEKHF2Q9H8W4 249 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 AKIRIN1Q9H9L7 192 aaPredicted RBP5.1□□□□□ -1.59
FXN-205ENST00000498653 LHX9Q9NQ69 397 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 DMRT3Q9NQL9 472 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 DDIT4Q9NX09 232 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 SLC12A6Q9UHW9 1150 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 AMFRQ9UKV5 643 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 TLR6Q9Y2C9 796 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 HBS1LQ9Y450 684 aaKnown RBP5.1□□□□□ -1.59
FXN-205ENST00000498653 ALG6Q9Y672 507 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 CAPN6Q9Y6Q1 641 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 MIF4GDA9UHW6 222 aaKnown RBP5.09□□□□□ -1.59
FXN-205ENST00000498653 KIF2AO00139 706 aaPredicted RBP5.09□□□□□ -1.59
FXN-205ENST00000498653 IRAK2O43187 625 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 CTIFO43310 598 aaKnown RBP5.09□□□□□ -1.59
FXN-205ENST00000498653 TLX2O43763 284 aaPredicted RBP5.09□□□□□ -1.59
FXN-205ENST00000498653 PRPSAP2O60256 369 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 WISP2O76076 250 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 FTCDO95954 541 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 IGLV3-25P01717 112 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 TUBB4AP04350 444 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 CYBBP04839 570 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 ALPPP05187 535 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 TNNT1P13805 278 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 POLR2EP19388 210 aaKnown RBP5.09□□□□□ -1.59
FXN-205ENST00000498653 TFE3P19532 575 aaPredicted RBP5.09□□□□□ -1.59
FXN-205ENST00000498653 CTNNA2P26232 953 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 ALDH4A1P30038 563 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 MIPP30301 263 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 CORO1AP31146 461 aaKnown RBP5.09□□□□□ -1.59
FXN-205ENST00000498653 CCR1P32246 355 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 GJC1P36383 396 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 CXCR3P49682 368 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 HK3P52790 923 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 AIF1P55008 147 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 MAZP56270 477 aaKnown RBP5.09□□□□□ -1.59
FXN-205ENST00000498653 MTA1Q13330 715 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 SQSTM1Q13501 440 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 PWP1Q13610 501 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 RPS6KA1Q15418 735 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 RAB6CQ53S08 254 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 BOLA3Q53S33 107 aa5.09□□□□□ -1.59
FXN-205ENST00000498653 ODF2Q5BJF6 829 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms