RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 OSER1Q9NX31 292 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 CHCHD3Q9NX63 227 aaKnown RBP3.61□□□□□ -1.83
CLK1-214ENST00000496205 MCM9Q9NXL9 1143 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 ASTN2O75129 1339 aaPredicted RBP3.61□□□□□ -1.83
CLK1-214ENST00000496205 ATXN2Q99700 1313 aaKnown RBP3.61□□□□□ -1.83
CLK1-214ENST00000496205 OR2M5A3KFT3 312 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 SMTNL1A8MU46 457 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 HS3ST1O14792 307 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 OR10H2O60403 315 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 KCNJ13O60928 360 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 TBCAO75347 108 aaKnown RBP3.6□□□□□ -1.83
CLK1-214ENST00000496205 CELF2O95319 508 aaKnown RBP3.6□□□□□ -1.83
CLK1-214ENST00000496205 GCNT3O95395 438 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 TRUB2O95900 331 aaKnown RBP3.6□□□□□ -1.83
CLK1-214ENST00000496205 SRCP12931 536 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 HLA-DOBP13765 273 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 ARSEP51690 589 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 CSE1LP55060 971 aaKnown RBP3.6□□□□□ -1.83
CLK1-214ENST00000496205 ISL1P61371 349 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 PPARDQ03181 441 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 SLC20A2Q08357 652 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 MYBPHQ13203 477 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 MELKQ14680 651 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 SNAPC1Q16533 368 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 CBWD6Q4V339 395 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 TCP11X2Q5H9J9 407 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 CBWD3Q5JTY5 395 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 RHBDF2Q6PJF5 856 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 DCLRE1AQ6PJP8 1040 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 FIGLAQ6QHK4 219 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 ARMC9Q7Z3E5 817 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 GALNTL5Q7Z4T8 443 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 AFAP1Q8N556 730 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 GCSAMQ8N6F7 178 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 OR52I2Q8NH67 350 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 NXNL1Q96CM4 212 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 DOCK7Q96N67 2140 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 EDEM3Q9BZQ6 932 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 SEMA6AQ9H2E6 1030 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 GAREM1Q9H706 876 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 CNOT10Q9H9A5 744 aaKnown RBP3.6□□□□□ -1.83
CLK1-214ENST00000496205 ERVMER34-1Q9H9K5 563 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 TBC1D17Q9HA65 648 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 PCDH9Q9HC56 1237 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 CHMP1AQ9HD42 196 aaPredicted RBP3.6□□□□□ -1.83
CLK1-214ENST00000496205 RCC2Q9P258 522 aaKnown RBP3.6□□□□□ -1.83
CLK1-214ENST00000496205 AMACRQ9UHK6 382 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 OSGIN1Q9UJX0 560 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 OR2W1Q9Y3N9 320 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 PTPRCP08575 1304 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 ZNF541Q9H0D2 1346 aa3.6□□□□□ -1.83
CLK1-214ENST00000496205 NDUFS4O43181 175 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 FYNP06241 537 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 CCR10P46092 362 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 KCNJ4P48050 445 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 PNRC1Q12796 327 aaPredicted RBP3.59□□□□□ -1.83
CLK1-214ENST00000496205 RALGDSQ12967 914 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 COASYQ13057 564 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 KRT33BQ14525 404 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 COG2Q14746 738 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 SLC10A5Q5PT55 438 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 RNASEH2BQ5TBB1 312 aaKnown RBP3.59□□□□□ -1.83
CLK1-214ENST00000496205 C9orf57Q5W0N0 161 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 SPSB3Q6PJ21 355 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 GFRALQ6UXV0 394 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 C16orf82Q7Z2V1 217 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 CENPVQ7Z7K6 275 aaPredicted RBP3.59□□□□□ -1.83
CLK1-214ENST00000496205 GPR180Q86V85 440 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 TMEM219Q86XT9 240 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 CEP57L1Q8IYX8 460 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 NDUFAF2Q8N183 169 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 SLC5A8Q8N695 610 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 MCUQ8NE86 351 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 BBS10Q8TAM1 723 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 TANKQ92844 425 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 MOAP1Q96BY2 351 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 PRMT6Q96LA8 375 aaPredicted RBP3.59□□□□□ -1.83
CLK1-214ENST00000496205 DPAGT1Q9H3H5 408 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 ANKZF1Q9H8Y5 726 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 LRRC4Q9HBW1 653 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 TMEM30AQ9NV96 361 aa3.59□□□□□ -1.83
CLK1-214ENST00000496205 EDDM13A0A1B0GTR0 161 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 PRSS51A0A1B0GVH4 220 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 GOLGA6L9A6NEM1 432 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 TRIM77I1YAP6 450 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 ZBTB43O43298 467 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 GAGE7O76087 117 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 PMS2P2O95744 297 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 GAGE12FP0CL80 117 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 GAGE12GP0CL81 117 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 GAGE12IP0CL82 117 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 VPREB1P12018 145 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 SCG2P13521 617 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 IFNAR1P17181 557 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 PTAFRP25105 342 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 AZGP1P25311 298 aaKnown RBP3.58□□□□□ -1.84
CLK1-214ENST00000496205 PSMA3P25788 255 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 EEF1DP29692 281 aaKnown RBP3.58□□□□□ -1.84
CLK1-214ENST00000496205 CLK1P49759 484 aaKnown RBP3.58□□□□□ -1.84
CLK1-214ENST00000496205 NPY4RP50391 375 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms