RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 E5RI56 91 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 QSOX1O00391 747 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 FFAR2O15552 330 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 PHGDHO43175 533 aaKnown RBP13.23□□□□□ -0.29
PTPN7-218ENST00000496197 SNX2O60749 519 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 GPC4O75487 556 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 ALDOAP04075 364 aaKnown RBP13.23□□□□□ -0.29
PTPN7-218ENST00000496197 INHBAP08476 426 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 HSPA14Q0VDF9 509 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 ILF3Q12906 894 aaKnown RBP eCLIP13.23□□□□□ -0.29
PTPN7-218ENST00000496197 ACSBG2Q5FVE4 666 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 METRNLQ641Q3 311 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 PAQR3Q6TCH7 311 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 CPNE9Q8IYJ1 553 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 PANX3Q96QZ0 392 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 GSDMCQ9BYG8 508 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 OR52A5Q9H2C5 316 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 CCDC68Q9H2F9 335 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 DNAAF2Q9NVR5 837 aaKnown RBP13.23□□□□□ -0.29
PTPN7-218ENST00000496197 FETUBQ9UGM5 382 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 ZNF180Q9UJW8 692 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 RUVBL2Q9Y230 463 aaKnown RBP13.23□□□□□ -0.29
PTPN7-218ENST00000496197 BTBD3Q9Y2F9 522 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 DHRS7Q9Y394 339 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 COMMD10Q9Y6G5 202 aa13.23□□□□□ -0.29
PTPN7-218ENST00000496197 ASCC3Q8N3C0 2202 aaKnown RBP13.22□□□□□ -0.29
PTPN7-218ENST00000496197 PRAMEF33A0A0G2JMD5 474 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 LMO7DNF2Z398 122 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 H3BMM5 538 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 TRIM38O00635 465 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 VPS26AO75436 327 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 MYF5P13349 255 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 CLCNKAP51800 687 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 ZNF844Q08AG5 666 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 CLCA4Q14CN2 919 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 ELOCQ15369 112 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 ZKSCAN8Q15776 578 aaPredicted RBP13.22□□□□□ -0.29
PTPN7-218ENST00000496197 DUS1LQ6P1R4 473 aaKnown RBP13.22□□□□□ -0.29
PTPN7-218ENST00000496197 OTOAQ7RTW8 1153 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 NAGSQ8N159 534 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 FSTL5Q8N475 847 aaPredicted RBP13.22□□□□□ -0.29
PTPN7-218ENST00000496197 ZBTB2Q8N680 514 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 ANKRD49Q8WVL7 239 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 RMDN2Q96LZ7 410 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 WWP1Q9H0M0 922 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 PSMC3IPQ9P2W1 217 aaPredicted RBP13.22□□□□□ -0.29
PTPN7-218ENST00000496197 SLC24A2Q9UI40 661 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 IKZF3Q9UKT9 509 aa13.22□□□□□ -0.29
PTPN7-218ENST00000496197 CFAP20Q9Y6A4 193 aaKnown RBP13.22□□□□□ -0.29
PTPN7-218ENST00000496197 COL5A1P20908 1838 aaPredicted RBP13.21□□□□□ -0.29
PTPN7-218ENST00000496197 ANKRD12Q6UB98 2062 aa13.21□□□□□ -0.29
PTPN7-218ENST00000496197 TRBV23OR9-2A0A075B6M9 112 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 OR52A4PA6NMU1 304 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 B4DGG1 531 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 TRIM49D1C9J1S8 452 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 TPP1O14773 563 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 LIN7AO14910 233 aaPredicted RBP13.21□□□□□ -0.3
PTPN7-218ENST00000496197 NOBOXO60393 691 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 DFNA5O60443 496 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 TCEA3O75764 348 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 TSPAN12O95859 305 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 CD9P21926 228 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 ATXN3P54252 364 aaPredicted RBP13.21□□□□□ -0.3
PTPN7-218ENST00000496197 IRF9Q00978 393 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 USP10Q14694 798 aaKnown RBP13.21□□□□□ -0.3
PTPN7-218ENST00000496197 CASP8Q14790 479 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 TMED2Q15363 201 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 AASDHQ4L235 1098 aaPredicted RBP13.21□□□□□ -0.3
PTPN7-218ENST00000496197 PPM1JQ5JR12 505 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 TDRPQ86YL5 185 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 FAM46DQ8NEK8 389 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 EEF1AKMT1Q8WVE0 214 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 SNX15Q9NRS6 342 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 TAS2R13Q9NYV9 303 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 SIRPGQ9P1W8 387 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 CSNK1G3Q9Y6M4 447 aa13.21□□□□□ -0.3
PTPN7-218ENST00000496197 LY6G6EA0A0G2JKS1 128 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 A0A1W2PPM1 405 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 TLDC2A0PJX2 215 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 KRT87PA6NCN2 255 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 C4orf47A7E2U8 309 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 PCDHGA12O60330 932 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 SLCO2B1O94956 709 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 TOP3BO95985 862 aaKnown RBP13.2□□□□□ -0.3
PTPN7-218ENST00000496197 ZNF883P0CG24 379 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 SLC35E2BP0CK96 405 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 CD59P13987 128 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 ZNF37AP17032 561 aaPredicted RBP13.2□□□□□ -0.3
PTPN7-218ENST00000496197 MAGEA12P43365 314 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 POU4F1Q01851 419 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 DLG1Q12959 904 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 PDAP1Q13442 181 aaKnown RBP13.2□□□□□ -0.3
PTPN7-218ENST00000496197 SYTL3Q4VX76 610 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 PLEKHS1Q5SXH7 462 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 CAPRIN2Q6IMN6 1127 aaKnown RBP13.2□□□□□ -0.3
PTPN7-218ENST00000496197 CYHR1Q6ZMK1 362 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 DBX2Q6ZNG2 339 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 PIWIL4Q7Z3Z4 852 aaKnown RBP13.2□□□□□ -0.3
PTPN7-218ENST00000496197 GKN2Q86XP6 184 aa13.2□□□□□ -0.3
PTPN7-218ENST00000496197 SLC22A15Q8IZD6 547 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms