RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ACSBG2Q5FVE4 666 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 DGKKQ5KSL6 1271 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 PLEKHS1Q5SXH7 462 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 WLSQ5T9L3 541 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 CRTC1Q6UUV9 634 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 DPY19L3Q6ZPD9 716 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 LRRC74BQ6ZQY2 392 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 CHSY3Q70JA7 882 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 ARPINQ7Z6K5 226 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 TMEM25Q86YD3 366 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 PIANPQ8IYJ0 282 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 PELI3Q8N2H9 469 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 CPA6Q8N4T0 437 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 TRAM1L1Q8N609 369 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 PDPRQ8NCN5 879 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 DTX3LQ8TDB6 740 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 BPIFB1Q8TDL5 484 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 TSPEARQ8WU66 669 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 EEF1AKMT1Q8WVE0 214 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 SKA2Q8WVK7 121 aaPredicted RBP6.82□□□□□ -1.32
USP39-219ENST00000496047 ING5Q8WYH8 240 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 ROPN1LQ96C74 230 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 RCN3Q96D15 328 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 FOPNLQ96NB1 174 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 LENG8Q96PV6 779 aaPredicted RBP6.82□□□□□ -1.32
USP39-219ENST00000496047 ZNF382Q96SR6 550 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 EFHD1Q9BUP0 239 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 APOL5Q9BWW9 433 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 BRD9Q9H8M2 597 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 WDR41Q9HAD4 459 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 RDH14Q9HBH5 336 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 SEMA4BQ9NPR2 832 aaPredicted RBP6.82□□□□□ -1.32
USP39-219ENST00000496047 SMOXQ9NWM0 555 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 NFKBIL1Q9UBC1 381 aaPredicted RBP6.82□□□□□ -1.32
USP39-219ENST00000496047 DKK3Q9UBP4 350 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 B4GALT6Q9UBX8 382 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 SLC7A8Q9UHI5 535 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 POLG2Q9UHN1 485 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 PCTPQ9UKL6 214 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 INTS6Q9UL03 887 aaKnown RBP6.82□□□□□ -1.32
USP39-219ENST00000496047 CCL26Q9Y258 94 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 SLC27A6Q9Y2P4 619 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 NDUFAF1Q9Y375 327 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 HCN4Q9Y3Q4 1203 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 HCFC2Q9Y5Z7 792 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 WNT6Q9Y6F9 365 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 NUMBLQ9Y6R0 609 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 MYO7AQ13402 2215 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 LAMA3Q16787 3333 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 PKD1L2Q7Z442 2459 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 COL4A3Q01955 1670 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 EDDM13A0A1B0GTR0 161 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 TSPAN11A1L157 253 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 TMEM233B4DJY2 109 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 CDC7O00311 574 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 SLC28A1O00337 649 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 IFRD1O00458 451 aaPredicted RBP6.81□□□□□ -1.32
USP39-219ENST00000496047 TRIM38O00635 465 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 MRASO14807 208 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 PIP5K1BO14986 540 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 SLC16A5O15375 505 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 CFLARO15519 480 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 RGS14O43566 566 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 OR1I1O60431 355 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 ENTPD5O75356 428 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 CDK14O94921 469 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 WDR47O94967 919 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 SIX3O95343 332 aaPredicted RBP6.81□□□□□ -1.32
USP39-219ENST00000496047 PRAMEF12O95522 483 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 CYP17A1P05093 508 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 GSTM1P09488 218 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 HGFP14210 728 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 ACADSP16219 412 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 KCNA5P22460 613 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 MAP4P27816 1152 aaKnown RBP6.81□□□□□ -1.32
USP39-219ENST00000496047 BMP8BP34820 402 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 CPOXP36551 454 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 CTSOP43234 321 aaPredicted RBP6.81□□□□□ -1.32
USP39-219ENST00000496047 SPINT3P49223 89 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 CDKN1CP49918 316 aaPredicted RBP6.81□□□□□ -1.32
USP39-219ENST00000496047 HNMTP50135 292 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 MTTPP55157 894 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 CDH13P55290 713 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 ERVK-8P63133 956 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 CDKL1Q00532 357 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 GSTM4Q03013 218 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 FOXM1Q08050 763 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 GTF2H2Q13888 395 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 DHCR24Q15392 516 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 RAB30Q15771 203 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 SMU1Q2TAY7 513 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 SPATS1Q496A3 300 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 CMPK2Q5EBM0 449 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 COQ5Q5HYK3 327 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 SAMD4BQ5PRF9 694 aaKnown RBP6.81□□□□□ -1.32
USP39-219ENST00000496047 REP15Q6BDI9 236 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 CLEC6AQ6EIG7 209 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 OGFOD2Q6N063 350 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 GTF2H2CQ6P1K8 395 aa6.81□□□□□ -1.32
USP39-219ENST00000496047 HACD2Q6Y1H2 254 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms