RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 ARMC6Q6NXE6 501 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 ZNF449Q6P9G9 518 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 TAS2R42Q7RTR8 314 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 LINC00523Q86TU6 105 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 BPHLQ86WA6 291 aaPredicted RBP12.45□□□□□ -0.42
PTPRF-214ENST00000496043 PPP1R3BQ86XI6 285 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 UNC5BQ8IZJ1 945 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 SIDT2Q8NBJ9 832 aaKnown RBP12.45□□□□□ -0.42
PTPRF-214ENST00000496043 GPR150Q8NGU9 434 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 STYXQ8WUJ0 223 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 CDKN2AIPNLQ96HQ2 116 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 ELMO2Q96JJ3 720 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 SLC41A2Q96JW4 573 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 TMEM121Q9BTD3 319 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 NLE1Q9NVX2 485 aaPredicted RBP12.45□□□□□ -0.42
PTPRF-214ENST00000496043 GEMIN8Q9NWZ8 242 aaKnown RBP12.45□□□□□ -0.42
PTPRF-214ENST00000496043 FAM8A1Q9UBU6 413 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 R3HDM2Q9Y2K5 976 aaKnown RBP12.45□□□□□ -0.42
PTPRF-214ENST00000496043 HEMK1Q9Y5R4 338 aaPredicted RBP12.45□□□□□ -0.42
PTPRF-214ENST00000496043 HEBP2Q9Y5Z4 205 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 CFAP20Q9Y6A4 193 aaKnown RBP12.45□□□□□ -0.42
PTPRF-214ENST00000496043 RPS6KL1Q9Y6S9 549 aa12.45□□□□□ -0.42
PTPRF-214ENST00000496043 IGHV5-51A0A0C4DH38 117 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 TCRBV7S2A1N4TA0A589 114 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 UBA6A0AVT1 1052 aaPredicted RBP12.44□□□□□ -0.42
PTPRF-214ENST00000496043 OR5K3A6NET4 321 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 H7C0S8 307 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 AP2A1O95782 977 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 MT-ND3P03897 115 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 ITGB6P18564 788 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 STAT5AP42229 794 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 CCR10P46092 362 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 PRLHRP49683 370 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 ACY1Q03154 408 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 SKIDA1Q1XH10 827 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTPRF-214ENST00000496043 SERPINA9Q86WD7 417 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 OOSP2Q86WS3 158 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 KMT5CQ86Y97 462 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 SPDYE1Q8NFV5 336 aaPredicted RBP12.44□□□□□ -0.42
PTPRF-214ENST00000496043 HM13Q8TCT9 377 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 NAT14Q8WUY8 206 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 DNAJC1Q96KC8 554 aaKnown RBP12.44□□□□□ -0.42
PTPRF-214ENST00000496043 FCRL4Q96PJ5 515 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 CD180Q99467 661 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 MAP3K3Q99759 626 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 FRMD8P1Q9BZ68 369 aaPredicted RBP12.44□□□□□ -0.42
PTPRF-214ENST00000496043 TSGA10Q9BZW7 698 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 ADNPQ9H2P0 1102 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 KIR3DX1Q9H7L2 352 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 VPS37BQ9H9H4 285 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 STARD5Q9NSY2 213 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 IL17BQ9UHF5 180 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 SLC24A2Q9UI40 661 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 RARRES3Q9UL19 164 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 PADI1Q9ULC6 663 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 GUCA1BQ9UMX6 200 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 PCDHB3Q9Y5E6 796 aa12.44□□□□□ -0.42
PTPRF-214ENST00000496043 IGLV3-16A0A075B6K0 115 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 TRBV5-4A0A0C4DH59 114 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 OR6C74A6NCV1 312 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 ERI2A8K979 691 aaKnown RBP12.43□□□□□ -0.42
PTPRF-214ENST00000496043 IFRD1O00458 451 aaPredicted RBP12.43□□□□□ -0.42
PTPRF-214ENST00000496043 CCL22O00626 93 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 KRT86O43790 486 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 SLC28A2O43868 658 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 KIAA0754O94854 1291 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 GAS8O95995 478 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 GSTM1P09488 218 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 FOLR1P15328 257 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 ZNF28P17035 718 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 TCN2P20062 427 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 ACRV1P26436 265 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 CDKN1CP49918 316 aaPredicted RBP12.43□□□□□ -0.42
PTPRF-214ENST00000496043 GDF10P55107 478 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 HSD11B2P80365 405 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 GSTM4Q03013 218 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 CACNG1Q06432 222 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 SEPT6Q14141 434 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 POU6F1Q14863 301 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 CRTC2Q53ET0 693 aaPredicted RBP12.43□□□□□ -0.42
PTPRF-214ENST00000496043 DNTTIP2Q5QJE6 756 aaKnown RBP12.43□□□□□ -0.42
PTPRF-214ENST00000496043 SEL1L2Q5TEA6 688 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 TAB3Q8N5C8 712 aaPredicted RBP12.43□□□□□ -0.42
PTPRF-214ENST00000496043 GALNT6Q8NCL4 622 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 OR4E2Q8NGC2 313 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 STAMBPL1Q96FJ0 436 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 FERD3LQ96RJ6 166 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 SLC25A18Q9H1K4 315 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 ZNF148Q9UQR1 794 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 CAPN6Q9Y6Q1 641 aa12.43□□□□□ -0.42
PTPRF-214ENST00000496043 COL6A6A6NMZ7 2263 aa12.42□□□□□ -0.42
PTPRF-214ENST00000496043 GOLGA6L3A6NEY3 463 aa12.42□□□□□ -0.42
PTPRF-214ENST00000496043 TLCD2A6NGC4 264 aa12.42□□□□□ -0.42
PTPRF-214ENST00000496043 AP2A2O94973 939 aa12.42□□□□□ -0.42
PTPRF-214ENST00000496043 PRKAR1AP10644 381 aa12.42□□□□□ -0.42
PTPRF-214ENST00000496043 PSMA3P25788 255 aa12.42□□□□□ -0.42
PTPRF-214ENST00000496043 DLSTP36957 453 aa12.42□□□□□ -0.42
PTPRF-214ENST00000496043 FDFT1P37268 417 aa12.42□□□□□ -0.42
PTPRF-214ENST00000496043 CD151P48509 253 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms