RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 PSKH2Q96QS6 385 aa14.05□□□□□ -0.16
CHMP2B-205ENST00000494980 CATSPERBQ9H7T0 1116 aa14.05□□□□□ -0.16
CHMP2B-205ENST00000494980 SP110Q9HB58 689 aa14.05□□□□□ -0.16
CHMP2B-205ENST00000494980 KIAA1468Q9P260 1216 aa14.05□□□□□ -0.16
CHMP2B-205ENST00000494980 PTGFRNQ9P2B2 879 aa14.05□□□□□ -0.16
CHMP2B-205ENST00000494980 H7C1Q1 480 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 SMAD7O15105 426 aaKnown RBP14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 P4HA2O15460 535 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 PGLSO95336 258 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 SIX3O95343 332 aaPredicted RBP14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 MSL3P1P0C860 447 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 CDH3P22223 829 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 IDSP22304 550 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 KRT9P35527 623 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 GABRB2P47870 512 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 LMAN1P49257 510 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 CTSCP53634 463 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 FKBP3Q00688 224 aaKnown RBP14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 CACNG1Q06432 222 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 ARMC6Q6NXE6 501 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 C16orf47Q6ZP98 133 aaPredicted RBP14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 CDC20BQ86Y33 519 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 GOT1L1Q8NHS2 421 aaPredicted RBP14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 HAS2Q92819 552 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 WDR24Q96S15 920 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 TIMM29Q9BSF4 260 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 AP1M1Q9BXS5 423 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 NOD2Q9HC29 1040 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 KCNJ16Q9NPI9 418 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 TRPS1Q9UHF7 1281 aa14.04□□□□□ -0.16
CHMP2B-205ENST00000494980 SVEP1Q4LDE5 3571 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 OR6C74A6NCV1 312 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 ARHGAP42A6NI28 874 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 CRLF1O75462 422 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 TSPAN12O95859 305 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 TPOP07202 933 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 SOX11P35716 441 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 HALP42357 657 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 RENBPP51606 427 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 KEAP1Q14145 624 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 RFTN1Q14699 578 aaPredicted RBP14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 HENMT1Q5T8I9 393 aaKnown RBP14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 ARMC12Q5T9G4 340 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 HMBOX1Q6NT76 420 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 GJB7Q6PEY0 223 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 ARHGAP36Q6ZRI8 547 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 CEP128Q6ZU80 1094 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 LRRTM4Q86VH4 590 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 FAM20CQ8IXL6 584 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 GPR135Q8IZ08 494 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 LILRB4Q8NHJ6 448 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 ASB5Q8WWX0 329 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 TSG101Q99816 390 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 SLC39A8Q9C0K1 460 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 RNF32Q9H0A6 362 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 METTL5Q9NRN9 209 aaKnown RBP14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 RASSF1Q9NS23 344 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 PCDHA7Q9UN72 937 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 DNAJC13O75165 2243 aa14.03□□□□□ -0.16
CHMP2B-205ENST00000494980 CHUKO15111 745 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 KMOO15229 486 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 VEGFDO43915 354 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 ZRANB2O95218 330 aaKnown RBP eCLIP14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 PRAMEF1O95521 474 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 CHRNB4P30926 498 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 ME1P48163 572 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 PMS1P54277 932 aaKnown RBP14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 CCDC14Q49A88 953 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 NKAIN1Q4KMZ8 207 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 KRTCAP3Q53RY4 240 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 RHBDD2Q6NTF9 364 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 EID3Q8N140 333 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 ARMC2Q8NEN0 867 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 OR11G2Q8NGC1 345 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 SUN3Q8TAQ9 357 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 PROKR1Q8TCW9 393 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 PIH1D2Q8WWB5 315 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 NTAN1Q96AB6 310 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 NEUROD4Q9HD90 331 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 SEPT11Q9NVA2 429 aaKnown RBP14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 DHCR7Q9UBM7 475 aaKnown RBP14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 POMT2Q9UKY4 750 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 MRPS2Q9Y399 296 aaKnown RBP14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 PPIL1Q9Y3C6 166 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 L3MBTL1Q9Y468 752 aa14.02□□□□□ -0.17
CHMP2B-205ENST00000494980 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.01□□□□□ -0.172e-6■■□□□ 13.9
CHMP2B-205ENST00000494980 NPIPA5E9PKD4 350 aa14.01□□□□□ -0.17
CHMP2B-205ENST00000494980 FGF10O15520 208 aaPredicted RBP14.01□□□□□ -0.17
CHMP2B-205ENST00000494980 ST6GAL1P15907 406 aa14.01□□□□□ -0.17
CHMP2B-205ENST00000494980 SDC4P31431 198 aa14.01□□□□□ -0.17
CHMP2B-205ENST00000494980 NKX6-1P78426 367 aaPredicted RBP14.01□□□□□ -0.17
CHMP2B-205ENST00000494980 SLC10A7Q0GE19 358 aa14.01□□□□□ -0.17
CHMP2B-205ENST00000494980 GALNT3Q14435 633 aa14.01□□□□□ -0.17
CHMP2B-205ENST00000494980 RPE65Q16518 533 aa14.01□□□□□ -0.17
CHMP2B-205ENST00000494980 NAPRTQ6XQN6 538 aa14.01□□□□□ -0.17
CHMP2B-205ENST00000494980 ENOSF1Q7L5Y1 443 aa14.01□□□□□ -0.17
CHMP2B-205ENST00000494980 C11orf96Q7Z7L8 435 aa14.01□□□□□ -0.17
CHMP2B-205ENST00000494980 ADGRG6Q86SQ4 1221 aa14.01□□□□□ -0.17
CHMP2B-205ENST00000494980 ZNF547Q8IVP9 402 aa14.01□□□□□ -0.17
CHMP2B-205ENST00000494980 CLYBLQ8N0X4 340 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms