RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 PCDHAC2Q9Y5I4 1007 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 ZNF608Q9ULD9 1512 aaPredicted RBP4.26□□□□□ -1.73
SMC4-224ENST00000494612 A0A087WYN8 130 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 MAGEA13PA6NCF6 341 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 LILRA5A6NI73 299 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 XRCC3O43542 346 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 SPRY1O43609 319 aaPredicted RBP4.26□□□□□ -1.73
SMC4-224ENST00000494612 CREG1O75629 220 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 APOA4P06727 396 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 VPREB1P12018 145 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 IL15P40933 162 aaPredicted RBP4.26□□□□□ -1.73
SMC4-224ENST00000494612 CTSCP53634 463 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 TROAPQ12815 778 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 ZNF234Q14588 700 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 ERMARDQ5T6L9 678 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 DHRS7BQ6IAN0 325 aaPredicted RBP4.26□□□□□ -1.73
SMC4-224ENST00000494612 TRNP1Q6NT89 227 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 ADGRA1Q86SQ6 560 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 KMT5CQ86Y97 462 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 OR2AJ1Q8NGZ0 328 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 LINGO1Q96FE5 620 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 PGAP3Q96FM1 320 aaPredicted RBP4.26□□□□□ -1.73
SMC4-224ENST00000494612 DACH2Q96NX9 599 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 POLR3CQ9BUI4 534 aaPredicted RBP4.26□□□□□ -1.73
SMC4-224ENST00000494612 FNDC11Q9BVV2 318 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 ANKRD2Q9GZV1 360 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 MMP27Q9H306 513 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 DENND2DQ9H6A0 471 aaPredicted RBP4.26□□□□□ -1.73
SMC4-224ENST00000494612 OPA3Q9H6K4 179 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 RETREG1Q9H6L5 497 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 MIOSQ9NXC5 875 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 MARCH4Q9P2E8 410 aaPredicted RBP4.26□□□□□ -1.73
SMC4-224ENST00000494612 RHCGQ9UBD6 479 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 CRNNQ9UBG3 495 aaPredicted RBP4.26□□□□□ -1.73
SMC4-224ENST00000494612 ZNF711Q9Y462 761 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 TMEM184BQ9Y519 407 aaPredicted RBP4.26□□□□□ -1.73
SMC4-224ENST00000494612 EIF4G3O43432 1585 aaKnown RBP4.26□□□□□ -1.73
SMC4-224ENST00000494612 TAF1P21675 1872 aa4.26□□□□□ -1.73
SMC4-224ENST00000494612 CGNL1Q0VF96 1302 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 IGHV4OR15-8A0A075B7B6 117 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 PRSS51A0A1B0GVH4 220 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 PRAC2D3DTV9 90 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 UBE2CO00762 179 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 TO15178 435 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 SSX4O60224 188 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 SYNCRIPO60506 623 aaKnown RBP4.25□□□□□ -1.73
SMC4-224ENST00000494612 GCNT3O95395 438 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 GGPS1O95749 300 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 IGKV3-20P01619 116 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 FAM106CPP0CH98 169 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 DAOP14920 347 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 CPT2P23786 658 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 MC5RP33032 325 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 ARCN1P48444 511 aaKnown RBP4.25□□□□□ -1.73
SMC4-224ENST00000494612 ZNF132P52740 706 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 PRDM2Q13029 1718 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 COASYQ13057 564 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 CAMK2DQ13557 499 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 C9orf152Q5JTZ5 239 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 C1orf141Q5JVX7 400 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 C9orf57Q5W0N0 161 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 UNQ6126/PRO20091Q6UXV3 157 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 Q75L30 129 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 CAMKMTQ7Z624 323 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 FAM114A1Q8IWE2 563 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 AFAP1Q8N556 730 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 KCNH5Q8NCM2 988 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 CFAP61Q8NHU2 1237 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 SNRNP27Q8WVK2 155 aaKnown RBP4.25□□□□□ -1.73
SMC4-224ENST00000494612 IGSF21Q96ID5 467 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 ZNF830Q96NB3 372 aaPredicted RBP4.25□□□□□ -1.73
SMC4-224ENST00000494612 IL17FQ96PD4 163 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 OR6C1Q96RD1 312 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 C16orf70Q9BSU1 422 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 OSER1Q9NX31 292 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 GDE1Q9NZC3 331 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 NPAP1Q9NZP6 1156 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 ERRFI1Q9UJM3 462 aaPredicted RBP4.25□□□□□ -1.73
SMC4-224ENST00000494612 YIPF1Q9Y548 306 aa4.25□□□□□ -1.73
SMC4-224ENST00000494612 ZNF644Q9H582 1327 aaPredicted RBP4.24□□□□□ -1.73
SMC4-224ENST00000494612 ZCWPW2A0A1B0GU75 182 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 HEPACAM2A8MVW5 462 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 TULP2O00295 520 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 MEIS2O14770 477 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 ZNF500O60304 480 aaPredicted RBP4.24□□□□□ -1.73
SMC4-224ENST00000494612 PRAMEF11O60813 436 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 SLCO2B1O94956 709 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 TRUB2O95900 331 aaKnown RBP4.24□□□□□ -1.73
SMC4-224ENST00000494612 LIPFP07098 398 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 SIRPAP78324 504 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 RPL36AP83881 106 aaKnown RBP4.24□□□□□ -1.73
SMC4-224ENST00000494612 SNTB1Q13884 538 aaKnown RBP4.24□□□□□ -1.73
SMC4-224ENST00000494612 ARMC3Q5W041 872 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 DSG4Q86SJ6 1040 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 NR2C2APQ86WQ0 139 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 TMEM173Q86WV6 379 aaPredicted RBP4.24□□□□□ -1.73
SMC4-224ENST00000494612 TICAM2Q86XR7 235 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 ZNF595Q8IYB9 648 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 TC2NQ8N9U0 490 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 SLC4A11Q8NBS3 891 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms