RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 ATP1B2P14415 290 aaPredicted RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 JUPP14923 745 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 XRCC1P18887 633 aaPredicted RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 MSH3P20585 1137 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 MGAT1P26572 445 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 NMBRP28336 390 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 GRNP28799 593 aaKnown RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 AKT1P31749 480 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 SESN2P58004 480 aaPredicted RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 HHEXQ03014 270 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 CFHR1Q03591 330 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 ZFP36L1Q07352 338 aaKnown RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 GTF2H3Q13889 308 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 SPIDRQ14159 915 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 NFE2L1Q14494 772 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 ITIH4Q14624 930 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 KIR2DS5Q14953 304 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 ZRANB3Q5FWF4 1079 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 FNBP1LQ5T0N5 605 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 RNASEH2BQ5TBB1 312 aaKnown RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 ARMC3Q5W041 872 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 AFTPHQ6ULP2 937 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 PACS1Q6VY07 963 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 RBM44Q6ZP01 1051 aaKnown RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 RIPOR1Q6ZS17 1223 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 DET1Q7L5Y6 550 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 NLRP9Q7RTR0 991 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 B3GNT8Q7Z7M8 397 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 SERPINA9Q86WD7 417 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 SLITRK4Q8IW52 837 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 MPP5Q8N3R9 675 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 BEND7Q8N7W2 519 aaPredicted RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 PPHLN1Q8NEY8 458 aaKnown RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 OR2L2Q8NH16 312 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 SGF29Q96ES7 293 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 ZNF514Q96K75 400 aaPredicted RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 CAPZA3Q96KX2 299 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 TTC25Q96NG3 672 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 COPS8Q99627 209 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 NRSN2Q9GZP1 204 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 ABCG4Q9H172 646 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 OSGEPL1Q9H4B0 414 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 SARS2Q9NP81 518 aaKnown RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 SYBUQ9NX95 663 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 BFARQ9NZS9 450 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 ZNF624Q9P2J8 865 aaPredicted RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 RNF14Q9UBS8 474 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 SOX13Q9UN79 622 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 DNAJC16Q9Y2G8 782 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 WDR37Q9Y2I8 494 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 MAP1BP46821 2468 aaKnown RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 ADAMTS20P59510 1910 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 TRBV23OR9-2A0A075B6M9 112 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 C17orf113A0A1B0GUU1 675 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 KLHL33A6NCF5 533 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 TMEM8BA6NDV4 472 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 MGAT4DA6NG13 374 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 LILRA5A6NI73 299 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 RHPN2P1A8MT19 583 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 CCDC188H7C350 402 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 DNALI1O14645 258 aaPredicted RBP8.59□□□□□ -1.03
ITGB1-217ENST00000494395 TP73O15350 636 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 SNX2O60749 519 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 AVILO75366 819 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 SLC2A4P14672 509 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 EPB42P16452 691 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 RPL10P27635 214 aaKnown RBP8.59□□□□□ -1.03
ITGB1-217ENST00000494395 CD1CP29017 333 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 CCKBRP32239 447 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 CSF2RBP32927 897 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 OR1D5P58170 312 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 SEMA3AQ14563 771 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 CLCA4Q14CN2 919 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 SAMD5Q5TGI4 173 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 METRNLQ641Q3 311 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 SYT10Q6XYQ8 523 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 SLC9B2Q86UD5 537 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 AMZ2Q86W34 360 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 LILRA3Q8N6C8 439 aaPredicted RBP8.59□□□□□ -1.03
ITGB1-217ENST00000494395 Q8N9G6 341 aaPredicted RBP8.59□□□□□ -1.03
ITGB1-217ENST00000494395 OR4L1Q8NH43 312 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 HEXDCQ8WVB3 486 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 GRAMD1AQ96CP6 724 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 MFSD3Q96ES6 412 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 LIN37Q96GY3 246 aaPredicted RBP8.59□□□□□ -1.03
ITGB1-217ENST00000494395 PRR11Q96HE9 360 aaPredicted RBP8.59□□□□□ -1.03
ITGB1-217ENST00000494395 SERPINB12Q96P63 405 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 GFM1Q96RP9 751 aaKnown RBP8.59□□□□□ -1.03
ITGB1-217ENST00000494395 NUDT22Q9BRQ3 303 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 UCK1Q9HA47 277 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 BRD7Q9NPI1 651 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 MARCH4Q9P2E8 410 aaPredicted RBP8.59□□□□□ -1.03
ITGB1-217ENST00000494395 CPNE7Q9UBL6 633 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 ATXN7L1Q9ULK2 861 aaPredicted RBP8.59□□□□□ -1.03
ITGB1-217ENST00000494395 KCNMB2Q9Y691 235 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 PRSS21Q9Y6M0 314 aa8.59□□□□□ -1.03
ITGB1-217ENST00000494395 DMXL2Q8TDJ6 3036 aa8.58□□□□□ -1.04
ITGB1-217ENST00000494395 PRAMEF33A0A0G2JMD5 474 aa8.58□□□□□ -1.04
ITGB1-217ENST00000494395 PMS2P1A4D2B8 440 aa8.58□□□□□ -1.04
ITGB1-217ENST00000494395 OR52A4PA6NMU1 304 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms