RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 ARRDC2Q8TBH0 407 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.04□□□□□ -1.12
RIF1-211ENST00000494333 FGF11Q92914 225 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 NINJ1Q92982 152 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 NAT6Q93015 286 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 FATE1Q969F0 183 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 HDAC11Q96DB2 347 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 DTD2Q96FN9 168 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 PDXPQ96GD0 296 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 ZNF830Q96NB3 372 aaPredicted RBP8.04□□□□□ -1.12
RIF1-211ENST00000494333 SMIM14Q96QK8 99 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 MCCC1Q96RQ3 725 aaPredicted RBP8.04□□□□□ -1.12
RIF1-211ENST00000494333 LGMNQ99538 433 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 CCDC3Q9BQI4 270 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 ANP32EQ9BTT0 268 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 TMEM168Q9H0V1 697 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 DPEP2Q9H4A9 486 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 SUDS3Q9H7L9 328 aaPredicted RBP8.04□□□□□ -1.12
RIF1-211ENST00000494333 FGF22Q9HCT0 170 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 PHPT1Q9NRX4 125 aaPredicted RBP8.04□□□□□ -1.12
RIF1-211ENST00000494333 GOLGA6AQ9NYA3 693 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 AMACRQ9UHK6 382 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 CD84Q9UIB8 345 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 CHKBQ9Y259 395 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 HYOU1Q9Y4L1 999 aa8.04□□□□□ -1.12
RIF1-211ENST00000494333 ASPMQ8IZT6 3477 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 TDRD6O60522 2096 aaKnown RBP8.03□□□□□ -1.12
RIF1-211ENST00000494333 PRSS38A1L453 326 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 C3orf70A6NLC5 250 aaPredicted RBP8.03□□□□□ -1.12
RIF1-211ENST00000494333 APOL1O14791 398 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 CASC3O15234 703 aaKnown RBP8.03□□□□□ -1.12
RIF1-211ENST00000494333 RRP8O43159 456 aaKnown RBP8.03□□□□□ -1.12
RIF1-211ENST00000494333 MTA2O94776 668 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 CLDN7O95471 211 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 PRLP01236 227 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 HLA-DQB2P05538 268 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 MYCLP1P12525 358 aaPredicted RBP8.03□□□□□ -1.12
RIF1-211ENST00000494333 KRT15P19012 456 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 COMTP21964 271 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 CA4P22748 312 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 HSD3B2P26439 372 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 ACTN2P35609 894 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 CD86P42081 329 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 SLC1A1P43005 524 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 MAGEA1P43355 309 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 GPR1P46091 355 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 LSSP48449 732 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 CDK3Q00526 305 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 PPIDQ08752 370 aaKnown RBP8.03□□□□□ -1.12
RIF1-211ENST00000494333 NIPAL4Q0D2K0 466 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 AP1B1Q10567 949 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 SPIDRQ14159 915 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 SSPNQ14714 243 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 FAM182AQ5T1J6 154 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 LRRC38Q5VT99 294 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 LRRC66Q68CR7 880 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 SLC9A4Q6AI14 798 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 RAET1GQ6H3X3 334 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 SARM1Q6SZW1 724 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 NPNTQ6UXI9 565 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 RBM44Q6ZP01 1051 aaKnown RBP8.03□□□□□ -1.12
RIF1-211ENST00000494333 RFLNAQ6ZTI6 216 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 B4GALNT4Q76KP1 1039 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 HEATR4Q86WZ0 1026 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 RFX6Q8HWS3 928 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 SFTPA2Q8IWL1 248 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 TRIM48Q8IWZ4 208 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 LSMEM2Q8N112 164 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 FAM26EQ8N5C1 309 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 CISD2Q8N5K1 135 aaKnown RBP8.03□□□□□ -1.12
RIF1-211ENST00000494333 CNTD1Q8N815 330 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 TC2NQ8N9U0 490 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 KYQ8NBH2 561 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 LPCAT1Q8NF37 534 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 GPR156Q8NFN8 814 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 WDR48Q8TAF3 677 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 SCAMP4Q969E2 229 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 AP2M1Q96CW1 435 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 ATXN7L3BQ96GX2 97 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 TDRD1Q9BXT4 1180 aaKnown RBP8.03□□□□□ -1.12
RIF1-211ENST00000494333 TEX101Q9BY14 249 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 KRTAP4-8Q9BYQ9 185 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 CD244Q9BZW8 370 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 ABCG8Q9H221 673 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 SYNDIG1Q9H7V2 258 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 POLR1BQ9H9Y6 1135 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 PCDH9Q9HC56 1237 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 INTS7Q9NVH2 962 aaKnown RBP8.03□□□□□ -1.12
RIF1-211ENST00000494333 INTUQ9ULD6 942 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 ENTPD2Q9Y5L3 495 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 AKAP13Q12802 2813 aa8.03□□□□□ -1.12
RIF1-211ENST00000494333 TP53BP1Q12888 1972 aaPredicted RBP8.02□□□□□ -1.12
RIF1-211ENST00000494333 ZNF487B1APH4 448 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 ANKRD66B4E2M5 251 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 ZNF561-AS1K7EIQ3 104 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 SPOPO43791 374 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 TCEA3O75764 348 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 C8BP07358 591 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 ZFXP17010 805 aaPredicted RBP8.02□□□□□ -1.13
RIF1-211ENST00000494333 ZNF30P17039 623 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms