RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 CSNK1G3Q9Y6M4 447 aa12.21□□□□□ -0.45
SNX17-208ENST00000493711 RIF1Q5UIP0 2472 aaKnown RBP12.21□□□□□ -0.45
SNX17-208ENST00000493711 TRIM49D1C9J1S8 452 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 RGS16O15492 202 aaPredicted RBP12.2□□□□□ -0.46
SNX17-208ENST00000493711 NIPSNAP2O75323 286 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 MT-ND3P03897 115 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 FUCA1P04066 466 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 ZNF806P0C7X5 589 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 COL6A2P12110 1019 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 ACP5P13686 325 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 KRT15P19012 456 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 SLCO1A2P46721 670 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 CLCN7P51798 805 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 ATXN3P54252 364 aaPredicted RBP12.2□□□□□ -0.46
SNX17-208ENST00000493711 CDKN2DP55273 166 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 TAS2R39P59534 338 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 IL2P60568 153 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 CTBSQ01459 385 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 GRIK2Q13002 908 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 ZKSCAN8Q15776 578 aaPredicted RBP12.2□□□□□ -0.46
SNX17-208ENST00000493711 RBM20Q5T481 1227 aaKnown RBP12.2□□□□□ -0.46
SNX17-208ENST00000493711 AGAP9Q5VTM2 703 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 METRNLQ641Q3 311 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 WASH2PQ6VEQ5 465 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 MICALCLQ6ZW33 695 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 NEK10Q6ZWH5 1172 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 RAPH1Q70E73 1250 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 GOLGA6L1Q8N7Z2 621 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 AVL9Q8NBF6 648 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 EPS8L3Q8TE67 593 aaKnown RBP12.2□□□□□ -0.46
SNX17-208ENST00000493711 GLMNQ92990 594 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 NDNQ99608 321 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 GPR21Q99679 349 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 DPEP2Q9H4A9 486 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 GPAMQ9HCL2 828 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 SARS2Q9NP81 518 aaKnown RBP12.2□□□□□ -0.46
SNX17-208ENST00000493711 MRPL40Q9NQ50 206 aaKnown RBP12.2□□□□□ -0.46
SNX17-208ENST00000493711 WASH6PQ9NQA3 447 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 KLC4Q9NSK0 619 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 EURLQ9NYK6 297 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.2□□□□□ -0.46
SNX17-208ENST00000493711 NCDNQ9UBB6 729 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 ACOT9Q9Y305 439 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 PLXNA2O75051 1894 aa12.2□□□□□ -0.46
SNX17-208ENST00000493711 A0A1B0GTQ1 180 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 SLC5A10A0PJK1 596 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 SMIM23A6NLE4 172 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 OR5K4A6NMS3 321 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 MAP2K7O14733 419 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 AQP9O43315 295 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 GPC4O75487 556 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 SLCO2B1O94956 709 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 ZNF883P0CG24 379 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 SAT1P21673 171 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 CCR7P32248 378 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 HALP42357 657 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 ABCG1P45844 678 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 CCT8P50990 548 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 KPNA2P52292 529 aaKnown RBP12.19□□□□□ -0.46
SNX17-208ENST00000493711 BNC1Q01954 994 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 BMPR2Q13873 1038 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 BOP1Q14137 746 aaKnown RBP12.19□□□□□ -0.46
SNX17-208ENST00000493711 HLA-BQ31612 363 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 ZNF658BQ4V348 819 aaPredicted RBP12.19□□□□□ -0.46
SNX17-208ENST00000493711 PRRT3Q5FWE3 981 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 LAYNQ6UX15 382 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 TAF8Q7Z7C8 310 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 CFAP206Q8IYR0 622 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 KRT222Q8N1A0 295 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 CD200R1Q8TD46 325 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 CCDC97Q96F63 343 aaPredicted RBP12.19□□□□□ -0.46
SNX17-208ENST00000493711 PDLIM5Q96HC4 596 aaKnown RBP12.19□□□□□ -0.46
SNX17-208ENST00000493711 TSNARE1Q96NA8 513 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 OLFM1Q99784 485 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 TMEM168Q9H0V1 697 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 COG4Q9H9E3 785 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 SNX15Q9NRS6 342 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 TBK1Q9UHD2 729 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 PCOLCE2Q9UKZ9 415 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 DOLKQ9UPQ8 538 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 PRKAB1Q9Y478 270 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 DMXL1Q9Y485 3027 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 ZFHX4Q86UP3 3567 aa12.19□□□□□ -0.46
SNX17-208ENST00000493711 TRPM6Q9BX84 2022 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 HMX2A2RU54 273 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 PRR19A6NJB7 356 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 IQCF5A8MTL0 148 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 LMO7DNF2Z398 122 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 IFRD1O00458 451 aaPredicted RBP12.18□□□□□ -0.46
SNX17-208ENST00000493711 TPP1O14773 563 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 PIAS2O75928 621 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 RPN2P04844 631 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 ANXA6P08133 673 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 SLC35G4P0C7Q5 338 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 MPC1LP0DKB6 136 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 ALPPL2P10696 532 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 ZNF37AP17032 561 aaPredicted RBP12.18□□□□□ -0.46
SNX17-208ENST00000493711 PBLDP30039 288 aaPredicted RBP12.18□□□□□ -0.46
SNX17-208ENST00000493711 ACTR1BP42025 376 aa12.18□□□□□ -0.46
SNX17-208ENST00000493711 MAGEA12P43365 314 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms