RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 CELF3Q5SZQ8 465 aaKnown RBP11.53□□□□□ -0.56
HDAC4-210ENST00000493582 OR6P1Q8NGX9 317 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 OR2T11Q8NH01 316 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 FBLIM1Q8WUP2 373 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 SEPT1Q8WYJ6 367 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 TSPAN17Q96FV3 270 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 CAMKK2Q96RR4 588 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 FSD1LQ9BXM9 530 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 ZNF717Q9BY31 904 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-210ENST00000493582 TNKS2Q9H2K2 1166 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 PKP3Q9Y446 797 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 ORC6Q9Y5N6 252 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 OR2A25A4D2G3 310 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 CLDN5O00501 218 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 KATNA1O75449 491 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 RECQL5O94762 991 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-210ENST00000493582 MED26O95402 600 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 JUNDP17535 347 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 ARF4P18085 180 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-210ENST00000493582 BAG6P46379 1132 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 KIAA0930Q6ICG6 404 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-210ENST00000493582 GRAMD2AQ8IUY3 354 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 OR2T12Q8NG77 320 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 OR5H6Q8NGV6 325 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 RASSF5Q8WWW0 418 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 NT5C3BQ969T7 300 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 NACC2Q96BF6 587 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 RHBDF1Q96CC6 855 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 HBEGFQ99075 208 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 FDXACB1Q9BRP7 624 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-210ENST00000493582 THUMPD3Q9BV44 507 aaKnown RBP11.53□□□□□ -0.56
HDAC4-210ENST00000493582 ANKHQ9HCJ1 492 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 CSADQ9Y600 493 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 MN1Q10571 1320 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-210ENST00000493582 IGKV6-21A0A0C4DH24 114 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 ZNF37AP17032 561 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-210ENST00000493582 DNAJB2P25686 324 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 GRK5P34947 590 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 CLCN5P51795 746 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 TUBA1BP68363 451 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 SEMA3BQ13214 749 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 KRR1Q13601 381 aaKnown RBP11.53□□□□□ -0.56
HDAC4-210ENST00000493582 TUBA1AQ71U36 451 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 RAB44Q7Z6P3 723 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-210ENST00000493582 TCAIMQ8N3R3 496 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 AMER2Q8N7J2 671 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 FNDC5Q8NAU1 212 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 REPS2Q8NFH8 660 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 ESAMQ96AP7 390 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 CDCA5Q96FF9 252 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 RANGRFQ9HD47 186 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-210ENST00000493582 BTBD3Q9Y2F9 522 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 A0A096LPI6 279 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 SLC12A8A0AV02 714 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 NCF1BA6NI72 391 aaPredicted RBP11.52□□□□□ -0.57
HDAC4-210ENST00000493582 NCF1CA8MVU1 366 aaPredicted RBP11.52□□□□□ -0.57
HDAC4-210ENST00000493582 DFNA5O60443 496 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 NCF1P14598 390 aaPredicted RBP11.52□□□□□ -0.57
HDAC4-210ENST00000493582 CD1DP15813 335 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 IGFBP5P24593 272 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 C21orf33P30042 268 aaPredicted RBP11.52□□□□□ -0.57
HDAC4-210ENST00000493582 RRM2P31350 389 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 ICAM3P32942 547 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 SCNN1AP37088 669 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 PRKCDQ05655 676 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 FADDQ13158 208 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 PRKG2Q13237 762 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 SLAMF1Q13291 335 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 MFSD10Q14728 455 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 NFE2Q16621 373 aaPredicted RBP11.52□□□□□ -0.57
HDAC4-210ENST00000493582 SPATA19Q7Z5L4 167 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 DPP9Q86TI2 863 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 ADHFE1Q8IWW8 467 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 FAM126BQ8IXS8 530 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 OR8H2Q8N162 312 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 OR5K1Q8NHB7 308 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 ANGPTL6Q8NI99 470 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 DPF3Q92784 378 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 SLC38A4Q969I6 547 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 TRIM63Q969Q1 353 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 FAM162AQ96A26 154 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 Q96MT0 163 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 PHOX2BQ99453 314 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 SDHCQ99643 169 aaPredicted RBP11.52□□□□□ -0.57
HDAC4-210ENST00000493582 DHRS9Q9BPW9 319 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 PRRG3Q9BZD7 231 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 IKZF5Q9H5V7 419 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 ACAD9Q9H845 621 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 VNN3Q9NY84 501 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 NPAP1Q9NZP6 1156 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 VAPAQ9P0L0 249 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 MARCH4Q9P2E8 410 aaPredicted RBP11.52□□□□□ -0.57
HDAC4-210ENST00000493582 OR12D3Q9UGF7 316 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 UNCXA6NJT0 531 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 CYP7B1O75881 506 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 DDOSTP39656 456 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 SLC14A2Q15849 920 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 CDONQ4KMG0 1287 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 YIF1BQ5BJH7 314 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 SULF1Q8IWU6 871 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms