RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 HALP42357 657 aa6.93□□□□□ -1.3
HERC4-211ENST00000492996 SH3BP2P78314 561 aa6.93□□□□□ -1.3
HERC4-211ENST00000492996 PHEXP78562 749 aa6.93□□□□□ -1.3
HERC4-211ENST00000492996 HPCAP84074 193 aa6.93□□□□□ -1.3
HERC4-211ENST00000492996 FASTKQ14296 549 aaKnown RBP6.93□□□□□ -1.3
HERC4-211ENST00000492996 ZNF678Q5SXM1 525 aa6.93□□□□□ -1.3
HERC4-211ENST00000492996 C16orf89Q6UX73 402 aa6.93□□□□□ -1.3
HERC4-211ENST00000492996 DNAJB7Q7Z6W7 309 aaPredicted RBP6.93□□□□□ -1.3
HERC4-211ENST00000492996 SLC22A9Q8IVM8 553 aa6.93□□□□□ -1.3
HERC4-211ENST00000492996 AFAP1L2Q8N4X5 818 aa6.93□□□□□ -1.3
HERC4-211ENST00000492996 HCAR2Q8TDS4 363 aa6.93□□□□□ -1.3
HERC4-211ENST00000492996 FATE1Q969F0 183 aa6.93□□□□□ -1.3
HERC4-211ENST00000492996 PBXIP1Q96AQ6 731 aa6.93□□□□□ -1.3
HERC4-211ENST00000492996 ZFRQ96KR1 1074 aaKnown RBP6.93□□□□□ -1.3
HERC4-211ENST00000492996 SLC30A3Q99726 388 aa6.93□□□□□ -1.3
HERC4-211ENST00000492996 SLC39A3Q9BRY0 314 aa6.93□□□□□ -1.3
HERC4-211ENST00000492996 AARSD1Q9BTE6 412 aaKnown RBP6.93□□□□□ -1.3
HERC4-211ENST00000492996 POLR3BQ9NW08 1133 aaPredicted RBP6.93□□□□□ -1.3
HERC4-211ENST00000492996 AK5Q9Y6K8 562 aa6.93□□□□□ -1.3
HERC4-211ENST00000492996 C2orf81A6NN90 581 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 PSMD12O00232 456 aaPredicted RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 BTN3A1O00481 513 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 ALPIP09923 528 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 GJA1P17302 382 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 ITGB6P18564 788 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 MC4RP32245 332 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 ARF5P84085 180 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 TRAF2Q12933 501 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 RALGDSQ12967 914 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 KIF19Q2TAC6 998 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 LIN52Q52LA3 116 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 SFT2D3Q587I9 215 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 PAOXQ6QHF9 649 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 TRMT11Q7Z4G4 463 aaKnown RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 ST13P4Q8IZP2 240 aaPredicted RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 WFDC5Q8TCV5 224 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 SERPINI1Q99574 410 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 CCT7Q99832 543 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 ECSITQ9BQ95 431 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 TDRD1Q9BXT4 1180 aaKnown RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 USP36Q9P275 1121 aaKnown RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 RNF112Q9ULX5 631 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 CARD8Q9Y2G2 431 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 TIMM22Q9Y584 194 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 ILVBLA1L0T0 632 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 NPEPPSL1A6NEC2 478 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 ANKRD66B4E2M5 251 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 DFNA5O60443 496 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 CDK14O94921 469 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 C1SP09871 688 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 LINC00032P0C843 101 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 MTHFD2P13995 350 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 CHRM3P20309 590 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 LPOP22079 712 aaPredicted RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 IGFBP4P22692 258 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 VARSP26640 1264 aaKnown RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 EEF1DP29692 281 aaKnown RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 SOX11P35716 441 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 AGTR2P50052 363 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 ZNF140P52738 457 aaPredicted RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 RHOAP61586 193 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 GSTM4Q03013 218 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 ACVR1Q04771 509 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 PTK2BQ14289 1009 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 VEPH1Q14D04 833 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 SLC14A2Q15849 920 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 PITRM1Q5JRX3 1037 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 CXorf57Q6NSI4 855 aaKnown RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 TMEM214Q6NUQ4 689 aaKnown RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 TPGS1Q6ZTW0 290 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 CAMK1DQ8IU85 385 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 SIDT2Q8NBJ9 832 aaKnown RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 BHLHE22Q8NFJ8 381 aaPredicted RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 CEP76Q8TAP6 659 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 HMGCLL1Q8TB92 370 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 ACDQ96AP0 544 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 ZNF599Q96NL3 588 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 MRPL1Q9BYD6 325 aaKnown RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 PCDHAC1Q9H158 963 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 EBF3Q9H4W6 596 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 ZNF385DQ9H6B1 395 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 TAS2R13Q9NYV9 303 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 GMPR2Q9P2T1 348 aaKnown RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 TRIM64CA6NLI5 447 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 CRCPO75575 148 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 ADRB1P08588 477 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 PSMC3P17980 439 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 CR2P20023 1033 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 PRDX3P30048 256 aaKnown RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 CD97P48960 835 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 AQP4P55087 323 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 HERVK_113P63132 956 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 ZXDBP98169 803 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 TNK2Q07912 1038 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 CDH18Q13634 790 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 AGERQ15109 404 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 AAGABQ6PD74 315 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 CYHR1Q6ZMK1 362 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 RAB44Q7Z6P3 723 aaPredicted RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 CPSF7Q8N684 471 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms