RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 C8GP07360 202 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 ENO2P09104 434 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-216ENST00000492977 LAMP2P13473 410 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 GM2AP17900 193 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 CDKL1Q00532 357 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 GTF2H2Q13888 395 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 PTK2BQ14289 1009 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 E2F5Q15329 346 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 PHKG1Q16816 387 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 TRMT5Q32P41 509 aaKnown RBP13.79□□□□□ -0.2
PTPN7-216ENST00000492977 GTF2H2CQ6P1K8 395 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 C16orf89Q6UX73 402 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 ZNF765Q7L2R6 523 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 DET1Q7L5Y6 550 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 KYQ8NBH2 561 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 CFAP61Q8NHU2 1237 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 GLYATL1Q969I3 302 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 RHBDF1Q96CC6 855 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 AP2M1Q96CW1 435 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 DTD2Q96FN9 168 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 RIPOR3Q96MK2 946 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 KCNA7Q96RP8 456 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 EGFL8Q99944 293 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 TUBB1Q9H4B7 451 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 EFCAB1Q9HAE3 211 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 RNPEPL1Q9HAU8 725 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 DYRK4Q9NR20 520 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 ZNF225Q9UK10 706 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 ASB1Q9Y576 335 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 COL4A3Q01955 1670 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 ATP6AP2A0A1C7CYW4 349 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 C1QTNF3-AMACRE9PGA6 284 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 PSMD12O00232 456 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-216ENST00000492977 SLC16A5O15375 505 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 TAPBPO15533 448 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 SPINT1O43278 529 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 SGTAO43765 313 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 PEX11AO75192 247 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 ENTPD5O75356 428 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 ATP6AP2O75787 350 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 GUCA1CO95843 209 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 OTCP00480 354 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 ADRB3P13945 408 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 LBPP18428 481 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 PRDX3P30048 256 aaKnown RBP13.79□□□□□ -0.2
PTPN7-216ENST00000492977 IL12RB1P42701 662 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 ACADVLP49748 655 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 STX1BP61266 288 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 CREB5Q02930 508 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 HSPA14Q0VDF9 509 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 STX5Q13190 355 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 SP140Q13342 867 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 KPNB1Q14974 876 aaKnown RBP13.79□□□□□ -0.2
PTPN7-216ENST00000492977 ITPRIPL2Q3MIP1 535 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 TMEM52BQ4KMG9 183 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 PGM2L1Q6PCE3 622 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 GOLGA7Q7Z5G4 137 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 SFTPA1Q8IWL2 248 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 DEFB107AQ8IZN7 70 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 ASZ1Q8WWH4 475 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 DLG3Q92796 817 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 ESAMQ96AP7 390 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 KXD1Q9BQD3 176 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 WRAP53Q9BUR4 548 aaKnown RBP13.79□□□□□ -0.2
PTPN7-216ENST00000492977 SLC12A9Q9BXP2 914 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 HDAC8Q9BY41 377 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 TRIM54Q9BYV2 358 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 CD244Q9BZW8 370 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 DCLRE1BQ9H816 532 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 NOL11Q9H8H0 719 aaKnown RBP13.79□□□□□ -0.2
PTPN7-216ENST00000492977 PARVBQ9HBI1 364 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 CLEC1BQ9P126 229 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 ITM2BQ9Y287 266 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 MYO9BQ13459 2157 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 AIM2O14862 343 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 CCNT2O60583 730 aaKnown RBP13.78□□□□□ -0.2
PTPN7-216ENST00000492977 MTX2O75431 263 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 APODP05090 189 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 ANXA5P08758 320 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 LINC00032P0C843 101 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 GDI1P31150 447 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 HSPA7P48741 367 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 RPIAP49247 311 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 NUDT2P50583 147 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 METAP1P53582 386 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 ERVPABLB-1P60509 514 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 FASTKQ14296 549 aaKnown RBP13.78□□□□□ -0.2
PTPN7-216ENST00000492977 FAM46CQ5VWP2 391 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 NAIF1Q69YI7 327 aaPredicted RBP13.78□□□□□ -0.2
PTPN7-216ENST00000492977 OGFOD2Q6N063 350 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 PARM1Q6UWI2 310 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 ERN2Q76MJ5 926 aaKnown RBP13.78□□□□□ -0.2
PTPN7-216ENST00000492977 SPATA19Q7Z5L4 167 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 NLRP8Q86W28 1048 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 PHYKPLQ8IUZ5 450 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 TCAIMQ8N3R3 496 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 ENDOVQ8N8Q3 282 aaKnown RBP13.78□□□□□ -0.2
PTPN7-216ENST00000492977 WDR60Q8WVS4 1066 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 ASB11Q8WXH4 323 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 RAB7BQ96AH8 199 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms