RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 IER2Q9BTL4 223 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 LRFN3Q9BTN0 628 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 TPSD1Q9BZJ3 242 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 FZD3Q9NPG1 666 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 OXSMQ9NWU1 459 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 WSB2Q9NYS7 404 aaPredicted RBP13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 BAIAP2L1Q9UHR4 511 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 GPR34Q9UPC5 381 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 OR1A2Q9Y585 309 aa13.84□□□□□ -0.19
PDZRN3-210ENST00000492909 NPEPPSL1A6NEC2 478 aa13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 PRR33A8MZF0 331 aa13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 LATO43561 262 aa13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 MYCLP1P12525 358 aaPredicted RBP13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 ENO3P13929 434 aaPredicted RBP13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 ZNF8P17098 575 aaPredicted RBP13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 HNRNPA2B1P22626 353 aaKnown RBP13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 ATP5F1P24539 256 aaPredicted RBP13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 HSPA14Q0VDF9 509 aa13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 OR4D1Q15615 310 aa13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 TSNQ15631 228 aaKnown RBP13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 DOK6Q6PKX4 331 aa13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 PIWIL4Q7Z3Z4 852 aaKnown RBP13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 ASZ1Q8WWH4 475 aa13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 CCDC126Q96EE4 140 aa13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 MYOCQ99972 504 aa13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 RNF112Q9ULX5 631 aa13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 TMEM98Q9Y2Y6 226 aa13.83□□□□□ -0.19
PDZRN3-210ENST00000492909 C10orf142B7Z368 130 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 GPR89AB7ZAQ6 455 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 CDC7O00311 574 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 DLX3O60479 287 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 TRIM13O60858 407 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 KERAO60938 352 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 LILRB5O75023 590 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 ATP5HO75947 161 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 GPR89BP0CG08 455 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 FGF3P11487 239 aaPredicted RBP13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 AVPR2P30518 371 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 CXCL12P48061 93 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 KCNC1P48547 511 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 CCR5P51681 352 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 PRKAA2P54646 552 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 ASPHQ12797 758 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 GBX1Q14549 363 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 KIAA0895LQ68EN5 471 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 RLN3Q8WXF3 142 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 FOXJ1Q92949 421 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 FUBP1Q96AE4 644 aaKnown RBP13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 ATOH8Q96SQ7 321 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 TACO1Q9BSH4 297 aaKnown RBP13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 GPR174Q9BXC1 333 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 C6orf106Q9H6K1 298 aaPredicted RBP13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 TXLNGQ9NUQ3 528 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 TSR3Q9UJK0 312 aaKnown RBP13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 IKZF3Q9UKT9 509 aa13.83□□□□□ -0.2
PDZRN3-210ENST00000492909 PLXND1Q9Y4D7 1925 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 IGHV1OR15-9A0A0B4J2B8 117 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 SYCE1LA8MT33 242 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 CACNB4O00305 520 aaPredicted RBP13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 FPGTO14772 594 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 NUAK1O60285 661 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 SMIM24O75264 130 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 H2AFYO75367 372 aaKnown RBP13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 DCTN3O75935 186 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 UNC5CO95185 931 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 SERPINE1P05121 402 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 GSTM1P09488 218 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 TPBGLP0DKB5 382 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 GRK2P25098 689 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 PXNP49023 591 aaPredicted RBP13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 GSTM4Q03013 218 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 SETDB1Q15047 1291 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 SYTL3Q4VX76 610 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 LIPMQ5VYY2 423 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 ZCCHC23Q6ZST2 131 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 ADAMTSL2Q86TH1 951 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 ZNF547Q8IVP9 402 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 C10orf82Q8WW14 230 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 EXT2Q93063 718 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 TMEM159Q96B96 161 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 LINC00615Q96LM1 132 aaPredicted RBP13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 APOOQ9BUR5 198 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 FAM126AQ9BYI3 521 aaPredicted RBP13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 MYLK2Q9H1R3 596 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 YY1AP1Q9H869 796 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 SLCO1B3Q9NPD5 702 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 FAM8A1Q9UBU6 413 aa13.82□□□□□ -0.2
PDZRN3-210ENST00000492909 TMEM202A6NGA9 273 aa13.81□□□□□ -0.2
PDZRN3-210ENST00000492909 A8MT66 165 aa13.81□□□□□ -0.2
PDZRN3-210ENST00000492909 GPC4O75487 556 aa13.81□□□□□ -0.2
PDZRN3-210ENST00000492909 IPO13O94829 963 aaKnown RBP13.81□□□□□ -0.2
PDZRN3-210ENST00000492909 SLCO2B1O94956 709 aa13.81□□□□□ -0.2
PDZRN3-210ENST00000492909 IGHV4-34P06331 123 aa13.81□□□□□ -0.2
PDZRN3-210ENST00000492909 KRT16P08779 473 aa13.81□□□□□ -0.2
PDZRN3-210ENST00000492909 EZRP15311 586 aaKnown RBP13.81□□□□□ -0.2
PDZRN3-210ENST00000492909 PBLDP30039 288 aaPredicted RBP13.81□□□□□ -0.2
PDZRN3-210ENST00000492909 AKT2P31751 481 aa13.81□□□□□ -0.2
PDZRN3-210ENST00000492909 CCR3P51677 355 aa13.81□□□□□ -0.2
PDZRN3-210ENST00000492909 BST1Q10588 318 aa13.81□□□□□ -0.2
PDZRN3-210ENST00000492909 STX3Q13277 289 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms