RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 WISP2O76076 250 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 KLHL18O94889 574 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 PRLP01236 227 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 CDH3P22223 829 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 LMAN1P49257 510 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 ITKQ08881 620 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 GALNT3Q14435 633 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 C3AR1Q16581 482 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 PPP6R3Q5H9R7 873 aaPredicted RBP13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 MARC1Q5VT66 337 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 IRAK1BP1Q5VVH5 260 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 C3orf20Q8ND61 904 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 LPCAT1Q8NF37 534 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 FOXC2Q99958 501 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 CNPY3Q9BT09 278 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 ADAM22Q9P0K1 906 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 TNFRSF10DQ9UBN6 386 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 NDOR1Q9UHB4 597 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 TINAGQ9UJW2 476 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 CSPG4Q6UVK1 2322 aa13.27□□□□□ -0.29
EXOSC3-207ENST00000490516 BIN1O00499 593 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 VEGFDO43915 354 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 SLC19A2O60779 497 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 CDK14O94921 469 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 POLR2CP19387 275 aaPredicted RBP13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 HCFC1P51610 2035 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 GSCP56915 257 aaPredicted RBP13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 CDR2Q01850 454 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 OGDHQ02218 1023 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 SKOR2Q2VWA4 1001 aaPredicted RBP13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 ISLR2Q6UXK2 745 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 PRIMA1Q86XR5 153 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 CARFQ8N187 725 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 GPR26Q8NDV2 337 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 GLYATL1Q969I3 302 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 EID2BQ96D98 161 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 THOC3Q96J01 351 aaKnown RBP13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 LYSMD1Q96S90 227 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 PEBP4Q96S96 227 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 TREX2Q9BQ50 279 aaPredicted RBP13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 C17orf62Q9BQA9 187 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 SNRNP25Q9BV90 132 aaKnown RBP13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 TDRD1Q9BXT4 1180 aaKnown RBP13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 LHPPQ9H008 270 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 KLHL25Q9H0H3 589 aa13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 IMP3Q9NV31 184 aaKnown RBP13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 IFT80Q9P2H3 777 aaPredicted RBP13.26□□□□□ -0.29
EXOSC3-207ENST00000490516 TCRBV5S1A1TA0A578 114 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 FGFR1OPO95684 399 aaKnown RBP13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 HBQ1P09105 142 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 UNGP13051 313 aaPredicted RBP13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 ST6GAL1P15907 406 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 VCLP18206 1134 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 CASP6P55212 293 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 DSC2Q02487 901 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 RBPJQ06330 500 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 MFAP5Q13361 173 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 DPYSQ14117 519 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 CAMK4Q16566 473 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 ANKRD20A8PQ5CZ79 823 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 ERMARDQ5T6L9 678 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 KLHDC7AQ5VTJ3 777 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 MRPL14Q6P1L8 145 aaKnown RBP13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 FAM83HQ6ZRV2 1179 aaPredicted RBP13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 ZNF677Q86XU0 584 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 TRAPPC5Q8IUR0 188 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 CCHCR1Q8TD31 782 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 CPLX3Q8WVH0 158 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 PCDHB18PQ96TA0 734 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 SMR3AQ99954 134 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 NAA15Q9BXJ9 866 aaKnown RBP13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 SYTL2Q9HCH5 934 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 C1GALT1Q9NS00 363 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 CCM2LQ9NUG4 571 aaPredicted RBP13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 ETNK2Q9NVF9 386 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 PLA2G3Q9NZ20 509 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 CWC15Q9P013 229 aaKnown RBP13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 PCSK1NQ9UHG2 260 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 POMT2Q9UKY4 750 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 ZDHHC9Q9Y397 364 aa13.25□□□□□ -0.29
EXOSC3-207ENST00000490516 AKAP6Q13023 2319 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 RGSL1A5PLK6 1076 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 ANKRD62A6NC57 917 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 EIF3CLB5ME19 914 aaKnown RBP13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 F8VZ95 297 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 SOCS6O14544 535 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 GFPT2O94808 682 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 MSL3P1P0C860 447 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 MTHFD1P11586 935 aaKnown RBP13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 MTIF2P46199 727 aaKnown RBP13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 NSFP46459 744 aaKnown RBP13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 ARG2P78540 354 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 DCDP81605 110 aaKnown RBP13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 PPP1R15BQ5SWA1 713 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 DNAJC24Q6P3W2 148 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 TMEM200AQ86VY9 491 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 ATPAF2Q8N5M1 289 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 SPATA3Q8NHX4 192 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 NSMCE1Q8WV22 266 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms